Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P17
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448...    30   2.8  
11_04_0329 - 16442298-16443734                                         29   3.6  
02_05_1245 + 35223504-35224778                                         29   3.6  
07_03_1125 - 24162298-24162586,24162730-24162783,24162940-241630...    29   4.8  
12_01_0580 + 4745639-4746528,4746666-4746747                           28   8.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  

>05_05_0195 + 23142830-23143714,23144288-23144314,23144657-23144866,
            23144976-23145242,23146290-23146376,23146495-23146553,
            23147166-23147768,23148063-23148192,23148570-23149100,
            23149636-23149743,23149911-23150456,23150957-23151079,
            23151494-23151709
          Length = 1263

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -3

Query: 790  PQPNDRAQRVSERGSGRAPNTQTASPRALADSLMQKNLPHLPLNLKHKMNAIVVGNLFIA 611
            P P       ++ GSG +         +L D+  QKN+     N+K ++ A++VG L +A
Sbjct: 1033 PAPTISVLSYADDGSGESLEFVKGLLGSLPDNAFQKNVLGQNWNMKQRVAAVLVGGLKLA 1092

Query: 610  A 608
            +
Sbjct: 1093 S 1093


>11_04_0329 - 16442298-16443734
          Length = 478

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +2

Query: 86  DRCFS*PRAFSSLRAXXXXXXXXXXXXXYASRLLAIRALVSPTLSYTRTIRRRRSVKNSF 265
           DRC + PRA +++ A              ASRLLA  A +SP  +  R +       NSF
Sbjct: 26  DRCAT-PRALAAVHAAMLVSGRLADDAFAASRLLAAHAALSPPGAVLRLLASLPCAPNSF 84


>02_05_1245 + 35223504-35224778
          Length = 424

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = -3

Query: 784 PNDRAQRVSERGSGRAPNTQTASPRALADSL--MQKNLPHLPLNLK-HKMNA 638
           P   A + S   S  AP+T TA+  + A SL  ++ +LP LPL L  H++ A
Sbjct: 61  PRATATQYSTTSSSSAPSTATATSSSTAASLQALRDSLPDLPLLLTFHELAA 112


>07_03_1125 -
           24162298-24162586,24162730-24162783,24162940-24163035,
           24163149-24163190,24163688-24163756,24164262-24164284
          Length = 190

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 379 HQLEKRACVNSKVSVTLCISVRIRPMCRNDCRSPCSLRK 263
           HQ++K + V  +    L IS+ I P   ND    CS R+
Sbjct: 128 HQVDKDSLVRKQALYILRISLDIFPSSENDAAQQCSRRR 166


>12_01_0580 + 4745639-4746528,4746666-4746747
          Length = 323

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 81  VAIGAFPNHGLSLRCVLDVSHE**ANNEADMRAGFWQFGPLFRLH 215
           + +GA+P H L LRCV ++S E       +++A  W      RLH
Sbjct: 279 ITVGAYPGHRLQLRCV-ELSRE----KFGEVKARVWWEENKARLH 318


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 693 NESAN---ARGEAVCVLGALPLPRSLTRCAR 776
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,019,947
Number of Sequences: 37544
Number of extensions: 312065
Number of successful extensions: 768
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)