Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P14
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00048-13|AAB53830.1|  484|Caenorhabditis elegans Maternal effec...   365   e-101
U00048-12|AAL27228.1|  507|Caenorhabditis elegans Maternal effec...   365   e-101
Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AF101316-2|AAC69230.1|  692|Caenorhabditis elegans Hypothetical ...    31   0.85 
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ...    29   3.4  

>U00048-13|AAB53830.1|  484|Caenorhabditis elegans Maternal effect
           lethal protein32, isoform a protein.
          Length = 484

 Score =  365 bits (898), Expect = e-101
 Identities = 167/243 (68%), Positives = 201/243 (82%)
 Frame = +3

Query: 156 LLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQ 335
           +L  ++ + DPE+FDI+  EK RQR GLE+IASENFTS  V+  L S + NKYSEG P  
Sbjct: 24  ILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGA 83

Query: 336 RYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGRIMG 515
           RYYGGNE+ID++E+L Q R+LE + L   +WGVNVQP SGSPANFAVYT IV  +GRIMG
Sbjct: 84  RYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMG 143

Query: 516 LDLPDGGHLTHGFFTATKKISATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIA 695
           LDLPDGGHLTHGFFT  +K+SATS FF+S+PYKVDP +GLIDYDKL + A LF+P+ IIA
Sbjct: 144 LDLPDGGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIA 203

Query: 696 GMSCYSRCLDYKRFREIADANGAYLMADMAHVSGLVAAGVIPSPFEYCDIVTTTTHKTLR 875
           G+SCY+R LDY+RFR+IA   GAYLM+DMAH+SGLVAAG+IPSPFEY D+VTTTTHK+LR
Sbjct: 204 GVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLR 263

Query: 876 GPR 884
           GPR
Sbjct: 264 GPR 266


>U00048-12|AAL27228.1|  507|Caenorhabditis elegans Maternal effect
           lethal protein32, isoform b protein.
          Length = 507

 Score =  365 bits (898), Expect = e-101
 Identities = 167/243 (68%), Positives = 201/243 (82%)
 Frame = +3

Query: 156 LLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQ 335
           +L  ++ + DPE+FDI+  EK RQR GLE+IASENFTS  V+  L S + NKYSEG P  
Sbjct: 47  ILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGA 106

Query: 336 RYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGRIMG 515
           RYYGGNE+ID++E+L Q R+LE + L   +WGVNVQP SGSPANFAVYT IV  +GRIMG
Sbjct: 107 RYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMG 166

Query: 516 LDLPDGGHLTHGFFTATKKISATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIA 695
           LDLPDGGHLTHGFFT  +K+SATS FF+S+PYKVDP +GLIDYDKL + A LF+P+ IIA
Sbjct: 167 LDLPDGGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIA 226

Query: 696 GMSCYSRCLDYKRFREIADANGAYLMADMAHVSGLVAAGVIPSPFEYCDIVTTTTHKTLR 875
           G+SCY+R LDY+RFR+IA   GAYLM+DMAH+SGLVAAG+IPSPFEY D+VTTTTHK+LR
Sbjct: 227 GVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLR 286

Query: 876 GPR 884
           GPR
Sbjct: 287 GPR 289


>Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical
           protein F09B9.1 protein.
          Length = 710

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 577 DIFLVAVKKPWVRCPP 530
           + F +A +KPWVRCPP
Sbjct: 477 NFFTIAYEKPWVRCPP 492


>AF101316-2|AAC69230.1|  692|Caenorhabditis elegans Hypothetical
           protein F52F10.4 protein.
          Length = 692

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 592 NIDVADIFLVAVKKPWVRCPP 530
           N D    F +A  KPW+RCPP
Sbjct: 461 NGDQTKFFNIAYSKPWIRCPP 481


>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
            protein Y46G5A.4 protein.
          Length = 2145

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +3

Query: 189  ELFDIIVKEKDRQRAGLEMI-ASENFTSVPVLQCLSSCLHNKYSEGMPNQ 335
            ELF + +KEK + RA +E+I AS  F +VP ++     +  + +E +P Q
Sbjct: 1829 ELFSMSLKEKTKTRALIEIISASSEFGNVP-MRHKEDVILRQLAERLPGQ 1877


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,752,225
Number of Sequences: 27780
Number of extensions: 425706
Number of successful extensions: 969
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)