Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P06
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   171   2e-44
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           88   4e-19
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           84   5e-18
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    28   0.43 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   3.1  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  171 bits (416), Expect = 2e-44
 Identities = 72/120 (60%), Positives = 90/120 (75%)
 Frame = +1

Query: 238 VGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDEN 417
           + + GL PG++GFH+HEKGDL+ GC STG H+NP+   HG PND  RHVGDLGN+  DEN
Sbjct: 52  INVVGLTPGKHGFHIHEKGDLTDGCASTGGHYNPDKVSHGAPNDQVRHVGDLGNIAADEN 111

Query: 418 HYSRIDLVDDQISLSGPHGIIGRAVVLHQKADDYGKSDHPDSRKTGNAGGRVACGVIGIL 597
             ++    D  +SL G   +IGRA+V+H + DD GK++HPDS KTGNAGGRVACGVIGIL
Sbjct: 112 GIAKTSYSDTVVSLYGARSVIGRAIVIHAEVDDLGKTNHPDSLKTGNAGGRVACGVIGIL 171


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 87.8 bits (208), Expect = 4e-19
 Identities = 36/88 (40%), Positives = 56/88 (63%)
 Frame = +1

Query: 331 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHQKA 510
           +NP+  DHG P+D N HVGDLGN+V      ++I + + +++L G   IIGR + + +  
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYE 60

Query: 511 DDYGKSDHPDSRKTGNAGGRVACGVIGI 594
           DD G+  H  S+ TGN+G  +AC +IG+
Sbjct: 61  DDLGRGKHDYSKTTGNSGNCIACAIIGV 88


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 84.2 bits (199), Expect = 5e-18
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = +1

Query: 379 HVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHQKADDYGKSDHPDSRKTGN 558
           H GD+GN+V DEN  +++DL   QI+LSG   ++GR++V+H   DD G   H  S+ TG+
Sbjct: 1   HAGDMGNIVADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTGD 60

Query: 559 AGGRVACGVIGI 594
           AG R+ACGVIG+
Sbjct: 61  AGARLACGVIGL 72


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 262 GEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPNDVN 375
           G+Y  +  + G  SGG  S  SH +P H   G  + VN
Sbjct: 453 GDYMNNCLQSGYFSGGFSSLHSHHSPHHVSPGMGSTVN 490


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = +1

Query: 313 LSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGP 468
           L   +H N       HP  +N +  D+ N++   N  S  +  D    LS P
Sbjct: 405 LEPHAHLNHLRHKSKHPIPINMNADDMNNILAPGNMGSLNESGDSDAHLSHP 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,960
Number of Sequences: 2352
Number of extensions: 15112
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)