Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_P04
(879 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 70 7e-11
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 62 1e-08
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 62 2e-08
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 59 1e-07
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 54 4e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 50 8e-05
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 49 1e-04
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 49 2e-04
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 45 0.002
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 40 0.083
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.25
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 37 0.78
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 37 0.78
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 35 3.1
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 34 4.1
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 70.1 bits (164), Expect = 7e-11
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKNPXNVXFKVRCSRFLY 219
MP EIKDI DFL+KAR DA SV+IKKN NV FKVRCSRFLY
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLY 43
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -3
Query: 217 TLVIXDKEKAEKLKQSLPPGXQVKEVK 137
TLVI DKEKAEKLKQSLPPG QVKEVK
Sbjct: 44 TLVITDKEKAEKLKQSLPPGLQVKEVK 70
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKNPXNVXFKVRCSRFLY 219
MP EIK+I DFL+KAR DA SV+IKKN N FKVRC+ +LY
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLY 43
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -3
Query: 217 TLVIXDKEKAEKLKQSLPPGXQVKEVK 137
TLV+ DK+KAEKLKQSLPPG QVKE+K
Sbjct: 44 TLVVADKDKAEKLKQSLPPGIQVKELK 70
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKNPXNVXFKVRCSRFLY 219
MP +I++I DFL+ AR DA SV+IKKN NV FKVRCSR+LY
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLY 43
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 217 TLVIXDKEKAEKLKQSLPPGXQVKEVK 137
TLVI DKEKAEKLKQSLPPG VKE+K
Sbjct: 44 TLVITDKEKAEKLKQSLPPGLAVKELK 70
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKNPXNVXFKVRCSRFLY 219
+P EI++I DFL+ A+ DA SV+IKKN NV FKVRCSR LY
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLY 59
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 54.4 bits (125), Expect = 4e-06
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKNPXNVXFKVRCSRFLY 219
MP +I +I DFL+ AR DA SV+IK++ V FKVRCSR+LY
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLY 43
Score = 39.1 bits (87), Expect = 0.15
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -3
Query: 217 TLVIXDKEKAEKLKQSLPPGXQVKEV 140
TL + D+EKA+KLKQSLPPG V+++
Sbjct: 44 TLCVFDQEKADKLKQSLPPGLSVQDL 69
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 654 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 752
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 50.0 bits (114), Expect = 8e-05
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = +3
Query: 630 CINESANARGEAVCVLGALPLPRSLTRCARSFGCG 734
CI + A AR EAV VL ALPL RS TRC RS GCG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCG 300
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 217 TLVIXDKEKAEKLKQSLPPGXQVKEVK 137
TLVI DKEKAEKLKQSLPPG VKE+K
Sbjct: 393 TLVITDKEKAEKLKQSLPPGLSVKELK 419
Score = 41.9 bits (94), Expect = 0.021
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -2
Query: 293 DAXSVQIKKNPXNVXFKVRCSRFLY 219
DA SV+IKKN NV FKVRCS++LY
Sbjct: 368 DAKSVKIKKNKDNVKFKVRCSKYLY 392
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKNPXNVXFKVRCSRFLY 219
MP EIK + +FL DA V++K NP FKVRCSR+LY
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSRYLY 43
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKN--PXNVXFKVRCSRFLY 219
MP E+ DI F+ R DA S +IK+N + FKVRC RFLY
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIKFKVRCQRFLY 45
Score = 38.3 bits (85), Expect = 0.25
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -3
Query: 307 RRGGKTPNRSK*RRTLXMSSSRFDAQGSCTTLVIXDKEKAEKLKQSLPPGXQVKEV 140
RR + R K R + Q TLV+ D +KA+KLKQSLPP ++ +V
Sbjct: 16 RRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQSLPPSLKIADV 71
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 39.9 bits (89), Expect = 0.083
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKNP-----XNVXFKVRCSRFLY 219
MP E+KD+ D+L + DA SV + K + FKVRCSR+LY
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKVRCSRYLY 48
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 700 ERGSGRAPNTQTASPRALADSLMQ 629
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 38.3 bits (85), Expect = 0.25
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 628 SALMNRPTXGERRFAYW 678
+ALMNRPT GERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 36.7 bits (81), Expect = 0.78
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -2
Query: 347 MPXEIKDIXDFLIKARXXDAXSVQIKKNPXNVXFKVRCSRFLY 219
MP ++++ L + +V++K N N FKVRC+++LY
Sbjct: 1 MPKQVQEFKQILKLLKSGSIRAVRVKTNGENTKFKVRCAKYLY 43
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 36.7 bits (81), Expect = 0.78
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -1
Query: 831 PFAGLLXTCXFLRYPLILWITVLP 760
P L TC F YPLILWITVLP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLP 42
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 34.7 bits (76), Expect = 3.1
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = -3
Query: 256 MSSSRFDAQGSCT--TLVIXDKEKAEKLKQSLPPGXQVKEV 140
+ ++F +GS TLV+ D KA+KL+QSLPP ++K +
Sbjct: 38 IKQTKFKVRGSRYQYTLVVNDAAKAKKLQQSLPPTLEIKNL 78
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 34.3 bits (75), Expect = 4.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 335 IKDIXDFLIKARXXDAXSVQIKKNPXNVXFKVRCSRFLY 219
+ I DFL D SV +K + + FK+RC R LY
Sbjct: 18 LTSIKDFLATCSRDDVESVTVKYSANDTKFKIRCPRMLY 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,518,110
Number of Sequences: 1657284
Number of extensions: 7671654
Number of successful extensions: 14857
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14855
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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