Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P01
         (1166 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     30   4.0  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    30   4.0  

>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 62  FFFFFFFFFFFFFFFFFFFF 81



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 63  FFFFFFFFFFFFFFFFFFFF 82



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 64  FFFFFFFFFFFFFFFFFFFF 83



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 65  FFFFFFFFFFFFFFFFFFFF 84



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 66  FFFFFFFFFFFFFFFFFFFF 85



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 67  FFFFFFFFFFFFFFFFFFFF 86


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 87  FFFFFFFFFFFFFFFFFFFF 106



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 88  FFFFFFFFFFFFFFFFFFFF 107



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           F  F FF    FF FFFFFF
Sbjct: 89  FFFFFFFFFFFFFFFFFFFF 108



 Score = 28.7 bits (61), Expect = 9.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 402 FXXFXFFXXXXFFXFFFFFF 343
           +  F FF    FF FFFFFF
Sbjct: 85  YAFFFFFFFFFFFFFFFFFF 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.312    0.128    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,794,502
Number of Sequences: 37544
Number of extensions: 35705
Number of successful extensions: 187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)