Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_O24
         (1301 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71262-4|CAA95814.1|  775|Caenorhabditis elegans Hypothetical pr...    29   7.2  

>Z71262-4|CAA95814.1|  775|Caenorhabditis elegans Hypothetical
           protein F22D6.5 protein.
          Length = 775

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
 Frame = +1

Query: 373 RNKRXXXPRNPPXHEENQNITRXHXXXXQNTEXNPRTXRKEEGH---PEXXKQXXRXXEG 543
           + KR    R+P  HE N+   R       N +   R  R+E+ H   P+  +   R  E 
Sbjct: 152 QRKREDNRRDPRAHEGNRRRDRTPERFRNNRDRRDRDGRREDRHRRSPDRRRDSDRKRED 211

Query: 544 DXXRXRSK 567
              +  SK
Sbjct: 212 GKRKDESK 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.304    0.120    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,652,050
Number of Sequences: 27780
Number of extensions: 117632
Number of successful extensions: 100
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3631930622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)