Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_O23
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0218 + 18219956-18220555                                         33   0.23 
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.8  
07_01_0119 - 908600-909592,909685-909885                               30   2.8  
12_01_0816 + 7502669-7503145                                           29   5.0  
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   6.6  
03_04_0061 - 16949038-16950006                                         29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  

>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = -2

Query: 812 NGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVSXKRQGRNRRAHEGASRGKR 633
           NGG     ++ A    +T  P     R R   R E  G  + KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 632 LVS 624
             S
Sbjct: 137 RAS 139


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 647 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 528
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>07_01_0119 - 908600-909592,909685-909885
          Length = 397

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 863 RGGLKTIVTG*GAAVGLNGGFVHTAQLGANDL 768
           RGG + + T  GA   L  G  H  +LGA+DL
Sbjct: 332 RGGARVVATEVGACEPLRAGVPHWPRLGADDL 363


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 831 RRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 700
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 775 FAPSWAVCTNPPFSPTAAPYPVTIVLSPP 861
           F P  AV   PP  P AAP PV + +  P
Sbjct: 67  FVPFHAVGPPPPPQPRAAPPPVAVAMGSP 95


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 614 RTIKIPGVSPWKLPRALSCSDPAAYXIPVRLSPFGKRGA 730
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 311 NESAN---ARGEAVCVLGALPLPRSLTRCAR 394
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,040,942
Number of Sequences: 37544
Number of extensions: 542105
Number of successful extensions: 1784
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)