Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_O21
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 151 7e-37
02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943... 150 1e-36
03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642... 135 5e-32
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 128 4e-30
01_06_1168 - 35073599-35073628,35075574-35076993,35077466-35078847 32 0.54
12_01_0480 - 3776563-3777099 29 5.0
03_06_0477 + 34210844-34211356 29 5.0
01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106... 29 5.0
01_01_0307 + 2513678-2513772,2514064-2514682 29 5.0
07_03_0840 + 21935504-21936424,21936516-21938177 29 6.6
07_03_0839 + 21916842-21917852,21917944-21919602 29 6.6
04_04_0714 + 27496678-27497392,27499080-27499138,27499179-27499370 28 8.7
>04_04_1445 - 33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 151 bits (366), Expect = 7e-37
Identities = 77/164 (46%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
Frame = +3
Query: 264 VLTNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLP 443
V T + V L + P DKI+A YIW+ G+G LR K RT++ + P +LP
Sbjct: 792 VSTETTGVVTRMEQLLNMDTTPF-TDKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELP 850
Query: 444 IWNFDGSSTNQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQ 623
WN+DGSST QA G +S+ L P+AI+KDPFR GN+ILVMCDTY EP +N R
Sbjct: 851 KWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAA 910
Query: 624 EAYD--KCKDDEPWFGIEQEYILLDSDLR-PFGWPPGGSPHRKG 746
+ + K PWFGIEQEY LL D+ P GWP GG P +G
Sbjct: 911 QVFSDPKVVSQVPWFGIEQEYTLLQRDVNWPLGWPVGGYPGPQG 954
Score = 76.6 bits (180), Expect = 3e-14
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +2
Query: 704 PLRVAPGWFPPPQGPYYCGVGANKVFARDLGRSHYRCCLYAGVPIAGTNAEVM 862
PL G +P PQGPYYC VG++K F RD+ +HY+ CLYAG+ I+GTN EVM
Sbjct: 941 PLGWPVGGYPGPQGPYYCAVGSDKSFGRDISDAHYKACLYAGINISGTNGEVM 993
>02_05_0661 -
30693701-30693853,30694037-30694196,30694290-30694381,
30694469-30694543,30694671-30694799,30694916-30695003,
30695118-30695224,30695645-30695693,30695802-30695905,
30696108-30696147,30696838-30696911
Length = 356
Score = 150 bits (364), Expect = 1e-36
Identities = 72/139 (51%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Frame = +3
Query: 339 DKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRA 518
+KI+A YIWI GSG LR K RTL+ P LP WN+DGSST QA G +S+ L P+A
Sbjct: 17 EKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQA 76
Query: 519 IYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYD--KCKDDEPWFGIEQEYILLD 692
I+KDPFR+GN+ILVMCD Y EP +N R + + + + +EPW+GIEQEY LL
Sbjct: 77 IFKDPFRKGNNILVMCDCYTPAGEPIPTNKRHNAAKIFSSPEVASEEPWYGIEQEYTLLQ 136
Query: 693 SDLR-PFGWPPGGSPHRKG 746
D+ P GWP GG P +G
Sbjct: 137 KDINWPLGWPVGGFPGPQG 155
Score = 78.6 bits (185), Expect = 6e-15
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = +2
Query: 704 PLRVAPGWFPPPQGPYYCGVGANKVFARDLGRSHYRCCLYAGVPIAGTNAEVM 862
PL G FP PQGPYYCG+GA+K F RD+ SHY+ CLYAG+ I+G N EVM
Sbjct: 142 PLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVM 194
>03_02_0210 -
6425708-6425863,6425955-6426114,6426204-6426295,
6426490-6426564,6426701-6426829,6427312-6427375,
6427761-6427867,6428795-6428843,6428955-6429058,
6429166-6429205,6429492-6429565
Length = 349
Score = 135 bits (326), Expect = 5e-32
Identities = 66/131 (50%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Frame = +3
Query: 336 ADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPR 515
+DKI+A YIW+ GSG LR K RT+ LP WN+DGSST QA G +S+ L P+
Sbjct: 16 SDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSSTGQAPGEDSEVILYPQ 75
Query: 516 AIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQE--AYDKCKDDEPWFGIEQEYILL 689
AI+KDPFRRG++ILVMCD Y EP +N R S + ++ + PW+GIEQEY LL
Sbjct: 76 AIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVVAEVPWYGIEQEYTLL 135
Query: 690 DSDLR-PFGWP 719
D+ P GWP
Sbjct: 136 QKDVNWPLGWP 146
Score = 61.3 bits (142), Expect = 1e-09
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +2
Query: 743 GPYYCGVGANKVFARDLGRSHYRCCLYAGVPIAGTNAEVM 862
GPYYC GA K F RD+ +HY+ C+YAG+ I+G N EVM
Sbjct: 147 GPYYCAAGAEKAFGRDIVDAHYKACIYAGINISGINGEVM 186
>03_05_0899 -
28619081-28619208,28619309-28619369,28619936-28620095,
28620200-28620237,28620341-28620394,28620562-28620636,
28620744-28620872,28621172-28621259,28621340-28621446,
28621547-28621595,28621683-28621786,28622019-28622133,
28622517-28622596
Length = 395
Score = 128 bits (310), Expect = 4e-30
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 3/143 (2%)
Frame = +3
Query: 384 HLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKDPFRRGNHILVM 563
HL+ + TL+ P LP WNFDGSST QA G +S+ L P+AI++DPFR+G +ILVM
Sbjct: 59 HLKEVNHTLSGPVDDPSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKGKNILVM 118
Query: 564 CDTYKYNMEPTESNNRISCQE--AYDKCKDDEPWFGIEQEYILLDSDLR-PFGWPPGGSP 734
CD Y N EP +NNR + ++ K +EPW+GIEQEY LL + P GWP GG P
Sbjct: 119 CDCYAPNGEPIPTNNRYNAARIFSHPDVKAEEPWYGIEQEYTLLQKHINWPLGWPLGGYP 178
Query: 735 HRKGHTTAVSVPTKSLPETLVEA 803
+G + KS +V+A
Sbjct: 179 GPQGPYYCAAGADKSYGRDIVDA 201
Score = 70.9 bits (166), Expect = 1e-12
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +2
Query: 704 PLRVAPGWFPPPQGPYYCGVGANKVFARDLGRSHYRCCLYAGVPIAGTNAEVM 862
PL G +P PQGPYYC GA+K + RD+ +HY+ CL+AG+ I+G NAEVM
Sbjct: 169 PLGWPLGGYPGPQGPYYCAAGADKSYGRDIVDAHYKACLFAGINISGINAEVM 221
>01_06_1168 - 35073599-35073628,35075574-35076993,35077466-35078847
Length = 943
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 690 DSDLRPFGWPPGGSPHRKGHTTAVSVPTKSLPETLVEATIDAVFMLAYRLPVQTL 854
+ D RP WP G R G T++S+P SL L A + + + LP L
Sbjct: 53 EDDDRPCSWPGVGCDARAGRVTSLSLPGASLSGRLPRALLRLDALASLSLPRNNL 107
>12_01_0480 - 3776563-3777099
Length = 178
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3
Query: 690 DSDLRPFGWPPGGSPHRKGHTTAVSVPTKSL 782
D RPF PG S H KG TT +V SL
Sbjct: 51 DEAARPFLGMPGWSSHEKGTTTTEAVVVTSL 81
>03_06_0477 + 34210844-34211356
Length = 170
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Frame = -1
Query: 890 GTDLXSXCEASLQRLYRQSVRQHKDSIDS-----GFDQGLWQRLCWH--RHRSSMALAVG 732
G DL + + ++ RL+R + ++H+D + GF+ G Q L H RHR MA A G
Sbjct: 84 GLDLGAIGDKAI-RLHRAADKEHRDKHECHICGLGFEMG--QALGGHMRRHREEMAAAGG 140
Query: 731 GTT 723
G++
Sbjct: 141 GSS 143
>01_05_0006 +
17008799-17009417,17010035-17010162,17010425-17010650,
17010792-17010925,17010988-17011161,17011234-17012238
Length = 761
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 352 ARILSAGSGRSLYRLSSVLDSTAFGELVKTGPDR 251
AR L +LY SS+LD + GEL++ PDR
Sbjct: 553 ARDLDPSQTSTLYCQSSLLDKSENGELIEMYPDR 586
>01_01_0307 + 2513678-2513772,2514064-2514682
Length = 237
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -1
Query: 233 YFGMRCISHFETGKAR--LCLEMFPRCEC*ILRENV 132
Y CISHF KAR LC E +P C I+ + V
Sbjct: 195 YRTQNCISHFLANKARAKLCTEFWPDETCNIISQFV 230
>07_03_0840 + 21935504-21936424,21936516-21938177
Length = 860
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 856 FSVCTGNRYASIKTASIVASTKVSGKDFVGTDTAVVWPLRWGEPPGGHPKGRRS 695
F V + ++I+ S V + K +G++ WP W EP H +G+ +
Sbjct: 250 FKVRIDSLSSTIRQRSDVYNAKHAGENATWMADGTHWPGTWFEPADNHQRGKHA 303
>07_03_0839 + 21916842-21917852,21917944-21919602
Length = 889
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 856 FSVCTGNRYASIKTASIVASTKVSGKDFVGTDTAVVWPLRWGEPPGGHPKGRRS 695
F V + ++I+ S V + K +G++ WP W EP H +G+ +
Sbjct: 280 FKVRIDSLSSTIRQRSDVYNAKHAGENATWMADGTHWPGTWFEPADNHQRGKHA 333
>04_04_0714 + 27496678-27497392,27499080-27499138,27499179-27499370
Length = 321
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 671 TGIYFTGFRSAPLRVAPGW-FPPPQGPYYCG 760
TG+ +T F + G+ PPP PYYCG
Sbjct: 196 TGLDYTYFTMPDALLEFGFTLPPPPPPYYCG 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,492,006
Number of Sequences: 37544
Number of extensions: 655789
Number of successful extensions: 1938
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1931
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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