Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_O18
         (1131 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0475 - 3669734-3671452                                           32   0.96 
11_01_0477 - 3688357-3690042                                           29   9.0  

>11_01_0475 - 3669734-3671452
          Length = 572

 Score = 31.9 bits (69), Expect = 0.96
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = +1

Query: 64  LRSSSNMRVLVLLAVL--GPRSLSHQRLVVATGRWSVTKEPMVNLDMKMKEL 213
           LR   +  V+V LAV+  G      + LV+ +G W+VT+ P+V+ D + ++L
Sbjct: 177 LRRGEDDMVVVDLAVMEEGDELEEAELLVLRSGEWTVTRAPVVHFDGRAEKL 228


>11_01_0477 - 3688357-3690042
          Length = 561

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 139 LVVATGRWSVTKEPMVNLDMKMKEL 213
           LV+ +G WSV + P+V+ D K +EL
Sbjct: 197 LVLRSGEWSVVRAPIVHDDGKAEEL 221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,138,035
Number of Sequences: 37544
Number of extensions: 218919
Number of successful extensions: 318
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3421418428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)