Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_O17
         (904 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052119-1|AAK93543.1|  392|Drosophila melanogaster SD07085p pro...    40   0.004
AF220040-1|AAF23824.1|  392|Drosophila melanogaster cathepsin D ...    40   0.004
AE013599-512|AAF59186.1|  392|Drosophila melanogaster CG1548-PA ...    40   0.004
AY113207-1|AAM29212.1|  404|Drosophila melanogaster AT05209p pro...    33   0.41 
AE013599-1891|AAF58249.1|  404|Drosophila melanogaster CG10104-P...    33   0.41 

>AY052119-1|AAK93543.1|  392|Drosophila melanogaster SD07085p
           protein.
          Length = 392

 Score = 40.3 bits (90), Expect = 0.004
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +3

Query: 342 LYRVPLHRMKTARXHFHXVGTELXLLKXKYDVTGPSPE 455
           L RVPLH+ ++AR HF  VGTEL  L+ +Y   G  PE
Sbjct: 27  LLRVPLHKFQSARRHFADVGTELQQLRIRYG-GGDVPE 63


>AF220040-1|AAF23824.1|  392|Drosophila melanogaster cathepsin D
           precursor protein.
          Length = 392

 Score = 40.3 bits (90), Expect = 0.004
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +3

Query: 342 LYRVPLHRMKTARXHFHXVGTELXLLKXKYDVTGPSPE 455
           L RVPLH+ ++AR HF  VGTEL  L+ +Y   G  PE
Sbjct: 27  LLRVPLHKFQSARRHFADVGTELQQLRIRYG-GGDVPE 63


>AE013599-512|AAF59186.1|  392|Drosophila melanogaster CG1548-PA
           protein.
          Length = 392

 Score = 40.3 bits (90), Expect = 0.004
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +3

Query: 342 LYRVPLHRMKTARXHFHXVGTELXLLKXKYDVTGPSPE 455
           L RVPLH+ ++AR HF  VGTEL  L+ +Y   G  PE
Sbjct: 27  LLRVPLHKFQSARRHFADVGTELQQLRIRYG-GGDVPE 63


>AY113207-1|AAM29212.1|  404|Drosophila melanogaster AT05209p
           protein.
          Length = 404

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 327 SSVMALYRVPLHRMKTARXHFHXVGTELXLLKXKY 431
           S  + LYRVPL R  +AR  F  +G  +  L+ KY
Sbjct: 23  SCKLQLYRVPLRRFPSARHRFEKLGIRMDRLRLKY 57


>AE013599-1891|AAF58249.1|  404|Drosophila melanogaster CG10104-PA
           protein.
          Length = 404

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 327 SSVMALYRVPLHRMKTARXHFHXVGTELXLLKXKY 431
           S  + LYRVPL R  +AR  F  +G  +  L+ KY
Sbjct: 23  SCKLQLYRVPLRRFPSARHRFEKLGIRMDRLRLKY 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,400,935
Number of Sequences: 53049
Number of extensions: 479928
Number of successful extensions: 497
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)