Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_O13
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0140 + 21090686-21091645,21092142-21092221,21092705-210929...    29   3.7  
06_03_0151 + 17270688-17270698,17271149-17271281,17271548-172715...    29   4.9  
02_01_0477 + 3431509-3431551,3432243-3432319,3432417-3432542,343...    29   4.9  
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996...    28   8.5  

>09_06_0140 +
           21090686-21091645,21092142-21092221,21092705-21092906,
           21093052-21093327,21093414-21093482,21093638-21093785,
           21094080-21094228,21094897-21095061,21095623-21095732,
           21095868-21095946,21095947-21096240
          Length = 843

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 344 NDVGQSLSRNVSIERRRRFPGHLLVHPIEMECNPKIHQLATKRC 475
           N++ +   R  + E+     GHLL +P+++E + K+  L    C
Sbjct: 779 NEIAEENWRRFTAEQLITLQGHLLKYPVKVEADGKVGPLPEHEC 822


>06_03_0151 +
           17270688-17270698,17271149-17271281,17271548-17271589,
           17271706-17271815,17271957-17272035,17272114-17272287,
           17272386-17272466,17272761-17272988,17273067-17273402,
           17273501-17273586,17273642-17273783,17274596-17274687,
           17274770-17274904,17275142-17275304,17275393-17275482,
           17275568-17275753,17276109-17276141,17276700-17276762,
           17276839-17276901,17276983-17277042,17277258-17277410,
           17277530-17277613,17278434-17278610,17278685-17278791,
           17278858-17279071,17279158-17279261,17279926-17280061,
           17280191-17280316,17280682-17280792,17280968-17281066,
           17281367-17281633,17281707-17281822,17281853-17282084,
           17282597-17282664,17282682-17282807,17282980-17283040
          Length = 1495

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
 Frame = +3

Query: 291 RNNDTQCLGGFARLYHEITTLVKAYPETLVLNA------GDVFQGTYWYTLLKWNVTQKF 452
           RNND  C GG    +H+      +  + ++  A       D   G YW TL K  +T++ 
Sbjct: 605 RNND--CKGGMMEEWHQKLHNNTSPDDVVICQALLDYIKSDFDIGVYWDTLKKDGITKER 662

Query: 453 INLLPNDVHAIGN--HEFDDG-VADLSRYIATLQ 545
           +      +H+  N   E  DG + DL  Y+ +L+
Sbjct: 663 LLSYDRPIHSEPNFRSEQKDGLLRDLGNYMRSLK 696


>02_01_0477 +
           3431509-3431551,3432243-3432319,3432417-3432542,
           3432638-3432715,3432797-3432952,3433044-3433140,
           3433595-3433817,3440445-3440760,3440895-3441390,
           3441485-3441651
          Length = 592

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 330 DERILPSIGCHYCDTSETGVRSLQIERENHCNALCEEEKYQFPPLESVKIKKQI 169
           D  IL + G H C        +  +E + H N L +EE+ + P   + K +K I
Sbjct: 465 DSMILEAHGNHTCQVQSNATNNAVVEGQQHGN-LNDEEEIEDPEQANTKGRKSI 517


>10_06_0039 -
           9966744-9967535,9968241-9968482,9969021-9969223,
           9969333-9970645
          Length = 849

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 566 YRHQRCALIAGHHQATRGCNKERS*YRSHRPDNYRNTDC 682
           + H     +AG H    GC+   S YR  RP+  R   C
Sbjct: 152 HAHAGAGSVAGAHADVAGCSTAVSPYRKVRPERARRGMC 190


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,178,553
Number of Sequences: 37544
Number of extensions: 447212
Number of successful extensions: 993
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)