Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_O06
         (973 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          39   8e-05
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      39   8e-05
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          32   0.007
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      32   0.007
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.78 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 38.7 bits (86), Expect = 8e-05
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 45  LPFWWNSGKYGAFKERRGEIYFFFYQQLYSSLLHGASVPMDWVKSLSFPGYSPLRTGY 218
           LP+W +S +Y   KE RG++Y+F ++QL +       +  D  K+  F    P+ +G+
Sbjct: 241 LPYWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFL-ERMSNDLGKTAEFDWNKPINSGF 297


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 38.7 bits (86), Expect = 8e-05
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 45  LPFWWNSGKYGAFKERRGEIYFFFYQQLYSSLLHGASVPMDWVKSLSFPGYSPLRTGY 218
           LP+W +S +Y   KE RG++Y+F ++QL +       +  D  K+  F    P+ +G+
Sbjct: 241 LPYWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFL-ERMSNDLGKTAEFDWNKPINSGF 297


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 32.3 bits (70), Expect = 0.007
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = +3

Query: 81  FKERRGEIYFFFYQQLYSS-LLHGASVPMDWVKSLSFPGYSPLRTGYLPPF---NSFYYP 248
           F + RGE YFF ++Q+ +   L   S  M  V  +S     P+ TGY P     N   +P
Sbjct: 250 FPQIRGEFYFFLHKQVLNRYYLERLSNDMGEVSYVSLD--HPIPTGYYPTMRFRNGLAFP 307

Query: 249 FAQRSNDYELHTEKNYEEIRFL 314
             +      LH +K  + I  L
Sbjct: 308 QRETGATVPLHMQKYVQMIHDL 329


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 32.3 bits (70), Expect = 0.007
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = +3

Query: 81  FKERRGEIYFFFYQQLYSS-LLHGASVPMDWVKSLSFPGYSPLRTGYLPPF---NSFYYP 248
           F + RGE YFF ++Q+ +   L   S  M  V  +S     P+ TGY P     N   +P
Sbjct: 250 FPQIRGEFYFFLHKQVLNRYYLERLSNDMGEVSYVSLD--HPIPTGYYPTMRFRNGLAFP 307

Query: 249 FAQRSNDYELHTEKNYEEIRFL 314
             +      LH +K  + I  L
Sbjct: 308 QRETGATVPLHMQKYVQMIHDL 329


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.4 bits (53), Expect = 0.78
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = +3

Query: 84  KERRGEIYFFFYQQL 128
           K+RRGE++++ +QQ+
Sbjct: 227 KDRRGELFYYMHQQI 241


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 189 PGYSPLRTGYLPPFNSFYYPFAQRSNDYELH 281
           PG  P   G+LPP    Y+P     + Y  H
Sbjct: 302 PGVYPSTAGFLPP---SYHPHQHHPSQYHPH 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,325
Number of Sequences: 438
Number of extensions: 3149
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32048835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)