Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_O05
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...   246   2e-65
Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...   177   7e-45
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...   131   7e-31
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...   131   7e-31
AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock pr...   131   7e-31
X77020-1|CAA54318.1|  158|Caenorhabditis elegans copper/zinc sup...    28   7.7  
U40798-4|AAA81474.2|  430|Caenorhabditis elegans Hypothetical pr...    28   7.7  
L20135-1|AAA28147.1|  158|Caenorhabditis elegans superoxide dism...    28   7.7  
AC006608-8|AAV34795.1|  158|Caenorhabditis elegans Sod (superoxi...    28   7.7  
AC006608-7|AAF39759.1|  180|Caenorhabditis elegans Sod (superoxi...    28   7.7  

>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score =  246 bits (602), Expect = 2e-65
 Identities = 116/176 (65%), Positives = 148/176 (84%)
 Frame = +1

Query: 355 VAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTD 534
           V+Q+KELR +A+ + FQ EVNRMMKLIINSLYRNKEIFLRELISN SDALDKIRL+SLTD
Sbjct: 51  VSQIKELRSKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTD 110

Query: 535 RGVLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSKMQDGE 714
              L    E+S++IKA+ + RLLHI D+GVGMTR DLINNLGTIA+SGT++FLSK+ D  
Sbjct: 111 PEQLRETEEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMD-T 169

Query: 715 KSAAPEMNDMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDANSFSVAEDPR 882
            +++ +  D+IGQFGVGFY+AFLVAD V V +K+NDD Q++W+SD+ SF++++DPR
Sbjct: 170 ATSSDQQQDLIGQFGVGFYAAFLVADRVVVTTKNNDDDQYIWESDSASFTISKDPR 225


>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score =  177 bits (432), Expect = 7e-45
 Identities = 90/166 (54%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
 Frame = +1

Query: 373 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA 552
           + + A+ + FQ E+ ++M LIIN+ Y NKEI+LRELISN SDALDKIR  +LT+   L+ 
Sbjct: 1   MSENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDT 60

Query: 553 NPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSKMQDGEKSAAPE 732
             EL I+I    +++ L I+D+G+GMT+ADL+NNLGTIAKSGT  F+  +Q G   +   
Sbjct: 61  GKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS--- 117

Query: 733 MNDMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDA-NSFSV 867
              MIGQFGVGFYSAFLVAD V V SK+NDD  + W+S A  SF V
Sbjct: 118 ---MIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVV 160


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score =  131 bits (316), Expect = 7e-31
 Identities = 76/176 (43%), Positives = 102/176 (57%), Gaps = 5/176 (2%)
 Frame = +1

Query: 361 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRG 540
           Q + +    Q + FQ E   +M ++  SLY + E+F+RELISN SDAL+K R   L  +G
Sbjct: 34  QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KG 91

Query: 541 VLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSKMQDGEKS 720
            +   P   IRI    DKR +   D+G+GM R DL+  LGTIAKSG+ DF+   ++  ++
Sbjct: 92  DVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAEA 150

Query: 721 AAPEMNDMIGQFGVGFYSAFLVADSVT-----VASKHNDDRQHVWQSDANSFSVAE 873
                  +IGQFGVGFYSAF+VADSV      V S   D  Q  W  D NS+ +AE
Sbjct: 151 -------VIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGD-NSYEIAE 198


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score =  131 bits (316), Expect = 7e-31
 Identities = 76/176 (43%), Positives = 102/176 (57%), Gaps = 5/176 (2%)
 Frame = +1

Query: 361 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRG 540
           Q + +    Q + FQ E   +M ++  SLY + E+F+RELISN SDAL+K R   L  +G
Sbjct: 34  QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KG 91

Query: 541 VLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSKMQDGEKS 720
            +   P   IRI    DKR +   D+G+GM R DL+  LGTIAKSG+ DF+   ++  ++
Sbjct: 92  DVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAEA 150

Query: 721 AAPEMNDMIGQFGVGFYSAFLVADSVT-----VASKHNDDRQHVWQSDANSFSVAE 873
                  +IGQFGVGFYSAF+VADSV      V S   D  Q  W  D NS+ +AE
Sbjct: 151 -------VIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGD-NSYEIAE 198


>AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock
           protein 75 protein.
          Length = 222

 Score =  131 bits (316), Expect = 7e-31
 Identities = 76/176 (43%), Positives = 102/176 (57%), Gaps = 5/176 (2%)
 Frame = +1

Query: 361 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRG 540
           Q + +    Q + FQ E   +M ++  SLY + E+F+RELISN SDAL+K R   L  +G
Sbjct: 34  QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KG 91

Query: 541 VLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSKMQDGEKS 720
            +   P   IRI    DKR +   D+G+GM R DL+  LGTIAKSG+ DF+   ++  ++
Sbjct: 92  DVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAEA 150

Query: 721 AAPEMNDMIGQFGVGFYSAFLVADSVT-----VASKHNDDRQHVWQSDANSFSVAE 873
                  +IGQFGVGFYSAF+VADSV      V S   D  Q  W  D NS+ +AE
Sbjct: 151 -------VIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGD-NSYEIAE 198


>X77020-1|CAA54318.1|  158|Caenorhabditis elegans copper/zinc
           superoxide dismutase protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = -3

Query: 792 VGHEEGGVE--ADAELADHVVHLGGRALLA----VLHLGQEVRGAGLGDGAEVVDEVGAR 631
           +G+ E G +  A  +L D +V L G   +     V+H GQ+  G G+GD AE   + G  
Sbjct: 84  LGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNA 143

Query: 630 HADA 619
            A A
Sbjct: 144 GARA 147


>U40798-4|AAA81474.2|  430|Caenorhabditis elegans Hypothetical
           protein R13A1.3 protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 20  IIGNSLRF*TGLVESTLKLGNLCQLTFS 103
           IIG+SL F    +E+ + LG  C L+FS
Sbjct: 285 IIGSSLLFFHSYIENAVSLGIFCPLSFS 312


>L20135-1|AAA28147.1|  158|Caenorhabditis elegans superoxide
           dismutase protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = -3

Query: 792 VGHEEGGVE--ADAELADHVVHLGGRALLA----VLHLGQEVRGAGLGDGAEVVDEVGAR 631
           +G+ E G +  A  +L D +V L G   +     V+H GQ+  G G+GD AE   + G  
Sbjct: 84  LGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNA 143

Query: 630 HADA 619
            A A
Sbjct: 144 GARA 147


>AC006608-8|AAV34795.1|  158|Caenorhabditis elegans Sod (superoxide
           dismutase) protein1, isoform b protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = -3

Query: 792 VGHEEGGVE--ADAELADHVVHLGGRALLA----VLHLGQEVRGAGLGDGAEVVDEVGAR 631
           +G+ E G +  A  +L D +V L G   +     V+H GQ+  G G+GD AE   + G  
Sbjct: 84  LGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNA 143

Query: 630 HADA 619
            A A
Sbjct: 144 GARA 147


>AC006608-7|AAF39759.1|  180|Caenorhabditis elegans Sod (superoxide
           dismutase) protein1, isoform a protein.
          Length = 180

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = -3

Query: 792 VGHEEGGVE--ADAELADHVVHLGGRALLA----VLHLGQEVRGAGLGDGAEVVDEVGAR 631
           +G+ E G +  A  +L D +V L G   +     V+H GQ+  G G+GD AE   + G  
Sbjct: 106 LGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNA 165

Query: 630 HADA 619
            A A
Sbjct: 166 GARA 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,458,996
Number of Sequences: 27780
Number of extensions: 267783
Number of successful extensions: 831
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)