Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_O02
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0214 + 12713865-12713973,12715780-12716011,12716556-127166...    30   2.0  
12_01_0676 + 5765154-5765241,5765329-5765453,5765533-5765604,576...    29   3.5  
10_08_0371 + 17265691-17265788,17265873-17265971,17266586-172666...    29   4.6  
02_05_0256 + 27201483-27202499,27203297-27203375,27204617-272049...    28   8.1  

>04_03_0214 +
           12713865-12713973,12715780-12716011,12716556-12716635,
           12716930-12717083,12717213-12717291,12717654-12717738,
           12718420-12718466,12720123-12720281
          Length = 314

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 28/123 (22%), Positives = 58/123 (47%)
 Frame = +1

Query: 379 ATEKFMKERVGTISVLTHCTTIIYP*GSVSLATLXEKLPTQQALQAVQDFLACGVENNLL 558
           A E   + RV  ++ +++  ++ YP G +    + ++    + L   Q  LA  + +NLL
Sbjct: 157 AIESGKEGRVVIVASVSY--SLSYP-GGICFDKINDESGYNRFLAYGQSKLANILHSNLL 213

Query: 559 TEDYHVVGHQQLIXTLSPGAVLQSEIESWPHWLDNARKVLG*YFIYTTNRSSITIIGLYI 738
           +        + ++ +L PGAV  + +  W   L  A + +G YF+    + + T+   Y+
Sbjct: 214 SSHLKEQDAKVIVNSLHPGAVATNILHHWCP-LYGAIRAIGKYFVKGVEQGAATV--CYV 270

Query: 739 TLN 747
            L+
Sbjct: 271 ALH 273


>12_01_0676 +
           5765154-5765241,5765329-5765453,5765533-5765604,
           5765728-5765802,5765880-5765905,5766709-5766870,
           5766963-5767037,5767133-5767204,5767289-5767363,
           5767461-5767529,5767839-5767910,5768030-5768161,
           5768430-5768920,5769315-5769476,5769570-5769709,
           5769818-5770037,5770398-5770633,5771560-5772051
          Length = 927

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = +1

Query: 580 GHQQLIXTLSPGAVLQSEIESWP----HW-LDNARKV 675
           GH  LI    PG +LQ E+E WP    HW L+ A K+
Sbjct: 85  GHSVLIRIAVPGLILQQELE-WPPSFNHWNLEQAPKL 120


>10_08_0371 + 17265691-17265788,17265873-17265971,17266586-17266628,
            17267250-17267321,17267400-17267495,17267609-17267842,
            17267914-17268097,17268247-17268358,17268447-17268533,
            17268703-17268841,17269628-17269718,17270045-17270154,
            17270309-17270413,17270982-17271055,17271379-17271454,
            17271786-17272022,17272419-17272490,17273082-17273153,
            17273240-17273304,17273306-17273383,17273384-17273486,
            17273769-17273858,17274873-17274980,17275063-17275113,
            17276126-17276203,17276284-17276346,17276944-17277140,
            17277243-17277312,17277640-17277828
          Length = 1030

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = +3

Query: 264  VSNDCFTDEECLLSVNSLRQHHM--RLAGFKDLGYSFV--AGGNGKIYE 398
            ++ DC   + CL ++N+L  +H   RL G   L    +   G NGK+ E
Sbjct: 877  LNKDCDIVDRCLTAINALASYHFKERLGGRGGLSSQLMESEGSNGKLQE 925


>02_05_0256 +
           27201483-27202499,27203297-27203375,27204617-27204946,
           27205029-27205198
          Length = 531

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 163 PNAAKFPSPNGVARSHVVNSP*RVLLTWW 249
           P+ A+F +P+   R H++ +    L  WW
Sbjct: 232 PSPARFTTPSATPRHHIITTKPSSLRIWW 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,201,089
Number of Sequences: 37544
Number of extensions: 457557
Number of successful extensions: 1081
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)