Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_N22
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.39 
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    28   8.4  
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616...    28   8.4  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 715 RKRHASRREKGGQVSGKRQGRXQESARGSFQGETPG 608
           R R   RR  GG+V+G+   R +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 627 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 508
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 291 NESAN---ARGEAVCVLGALPLPRSLTRCAR 374
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 729 QREL*ESATLPEGRKAD-RYPVSGRVGXRRAHEGASRGKRLVS 604
           QREL   AT P     D R  ++GR   RR  + A+R +R VS
Sbjct: 32  QRELPRQATPPPRGTGDLRDQINGRRKARRTRDDANRSRRHVS 74


>07_03_0697 +
           20759176-20759817,20760592-20760708,20761422-20761696,
           20761906-20762068,20762293-20762421,20762989-20763713,
           20763853-20764081
          Length = 759

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 517 RFSIGSAPLDEHHKNRRSSQRWRNP 591
           RFS  SAP+D+H + RR      NP
Sbjct: 132 RFSSSSAPVDKHGRRRRKKGGRENP 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,987,578
Number of Sequences: 37544
Number of extensions: 494022
Number of successful extensions: 1385
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)