Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_N21
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 42 8e-04
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 36 0.051
AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical ... 34 0.16
AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical ... 34 0.16
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 32 0.47
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 32 0.47
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 31 0.83
AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 li... 31 1.1
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.4
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 31 1.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 31 1.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 30 1.9
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 30 1.9
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 30 2.5
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 30 2.5
Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 4.4
X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1 prot... 29 4.4
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1 ... 29 4.4
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 29 4.4
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 28 7.7
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 7.7
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 28 7.7
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 41.5 bits (93), Expect = 8e-04
Identities = 31/97 (31%), Positives = 38/97 (39%)
Frame = +3
Query: 351 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAG 530
P PT + P P P + PS+I PPP P P+ L P AN
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPP----PPLPSEEKKNPL-PTANNGHTD 1414
Query: 531 PGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAP 641
G + T + N YSMPP + EGS R P
Sbjct: 1415 NGSDDIDRNVPTPPSQNQYSMPPPVMGGHEGSWRGGP 1451
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 35.5 bits (78), Expect = 0.051
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Frame = +3
Query: 339 VRQNPWTPTKRRGPIAAEASS--PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLA 512
VRQNP P ++ P + +A+ P PA P + PP + P PA QK P+
Sbjct: 377 VRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPA----QKAQPVT 432
Query: 513 -NIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGE---AKEGSKRAAPAFSITGRGKFS 674
A A P S + S P++ + KE S + P + R FS
Sbjct: 433 QQQASAPPTSPSAPVQAPNTPTQKASSQDPIVQQDPPPKEPSISSEPTTTKKPRKSFS 490
Score = 28.3 bits (60), Expect = 7.7
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Frame = +3
Query: 324 ETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPP-PESRKPRAPAFTFGQKL 500
+TP V+Q P P ++ P A + P PA P + PP P ++ +AP +
Sbjct: 302 QTPP-VQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAPVV----QQ 356
Query: 501 DPLANIAKAGPGPASYNTEGMTAKAP-NTYSMPPVLGEAKEGSKRAAP 641
P + +A P P + P P +A + + AP
Sbjct: 357 APAPPVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAP 404
>AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5a protein.
Length = 599
Score = 33.9 bits (74), Expect = 0.16
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
Frame = +3
Query: 351 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDP--LANIAK 524
P+ P+ + P++ +P A ++P+ K P E R P T G P NI
Sbjct: 195 PYEPSMK--PVSTYPMAPIFAE-TIPTSPAKDPSEGYVTR-PISTVGHPSPPPLFPNI-- 248
Query: 525 AGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPG 704
P + + A+ T +M PV+ + P F I F + G+ PG
Sbjct: 249 ----PVPQRSPPVVARVFTTSTMAPVMFTFPTTTTPLMPLFPIIPNVHFKQGVGVPFAPG 304
Query: 705 TYTTDRAAAALTKRPPAFTMAP 770
T T + A+ P A+ AP
Sbjct: 305 TLPTTKVDASKWNDPSAYATAP 326
>AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5b protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.16
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
Frame = +3
Query: 351 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDP--LANIAK 524
P+ P+ + P++ +P A ++P+ K P E R P T G P NI
Sbjct: 197 PYEPSMK--PVSTYPMAPIFAE-TIPTSPAKDPSEGYVTR-PISTVGHPSPPPLFPNI-- 250
Query: 525 AGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPG 704
P + + A+ T +M PV+ + P F I F + G+ PG
Sbjct: 251 ----PVPQRSPPVVARVFTTSTMAPVMFTFPTTTTPLMPLFPIIPNVHFKQGVGVPFAPG 306
Query: 705 TYTTDRAAAALTKRPPAFTMAP 770
T T + A+ P A+ AP
Sbjct: 307 TLPTTKVDASKWNDPSAYATAP 328
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.27
Identities = 47/160 (29%), Positives = 53/160 (33%), Gaps = 2/160 (1%)
Frame = +3
Query: 336 GVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKP-PPESRKPRAPAFTFGQKLDPLA 512
G NP P K + EA +P P P G P PP P PA G+ P A
Sbjct: 127 GAPGNPGAPGKGAA-VPCEAKTPPPCK---PCPAGPPGPPGPDGPAGPAGPDGEAGSPAA 182
Query: 513 NIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLM 692
PGP+ A T P G A E + A G
Sbjct: 183 PSPPGPPGPSGPAGPAGNDGAAGT---PGPDGPAGESTYPEPAAPGPAG----PPGPAGP 235
Query: 693 PGP-GTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPG 809
PGP G T AA PP AP + P TA PG
Sbjct: 236 PGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPG 275
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.47
Identities = 43/188 (22%), Positives = 65/188 (34%), Gaps = 10/188 (5%)
Frame = +3
Query: 270 KSGLTHASSLLVKQSISCETPMGVRQNPWT--PTKRRGPIAAEASSPGPAVVSLPSLIGK 443
++G +A++ VK + + TP +N PT P + P P + P K
Sbjct: 138 QTGDPYATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTK 197
Query: 444 PPPESRKPRAPAFTFGQKLDPLANIAKAGP-------GPASYNTEGMTAKAPNTYSMPPV 602
PP P T +++ +A + K P PA NT T + PP
Sbjct: 198 APPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKPTKAAPPA 257
Query: 603 LGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRP-PAFTMAPRRE 779
P + T +E K +P P T A T+ P P P++
Sbjct: 258 PTPVPNPVPSPPPPPANT---TVTEEKTTVP-PATDEPAPKTVATTENPKPIDNSTPQKP 313
Query: 780 LKPPTAAV 803
PP V
Sbjct: 314 PNPPVPIV 321
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 32.3 bits (70), Expect = 0.47
Identities = 42/143 (29%), Positives = 56/143 (39%)
Frame = +3
Query: 378 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 557
P+AA + P V++ P+ + PP P AP A + A P P
Sbjct: 50 PVAAPVLAAAPTVLAAPAPLLAPPAPLLAPPAPVLAAAPAFAAPAPVFAAPPAPV----- 104
Query: 558 GMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAAL 737
+ A AP + PPV A S AP + F+ A L P P AA A+
Sbjct: 105 -LAAPAP--FLAPPVPPVAPIVS-AFAPR-PVLAAPAFAPAPILAPRPVL-----AAPAI 154
Query: 738 TKRPPAFTMAPRRELKPPTAAVP 806
PA +APR L P A+P
Sbjct: 155 PAFAPAPLLAPRPVLAAP--AIP 175
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 32.3 bits (70), Expect = 0.47
Identities = 26/103 (25%), Positives = 36/103 (34%)
Frame = +3
Query: 330 PMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPL 509
P V+Q P P P A + PGPA V +P P + +P A P+
Sbjct: 62 PASVQQQPEAPAP--APTAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDA----PAAAPV 115
Query: 510 ANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAA 638
+ P P + T P V+ A E + AA
Sbjct: 116 QETPQVAPAPETPAPAPETPAPAPVQETPQVVAPAPEPTPEAA 158
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 309 QSISCETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 479
QS + ++ + V + PT RR P+ SS PA S P+ P P +KP PA
Sbjct: 200 QSFNADSSI-VEEASTIPTNRRAPMLIAPSST-PAGPSKPTARKPPTPRFKKPSTPA 254
>AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 like
protein 2, isoformb protein.
Length = 173
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/117 (22%), Positives = 50/117 (42%)
Frame = +3
Query: 291 SSLLVKQSISCETPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPR 470
S + V ++ + +TP + P + T + A+ ++ P +++ + P ++KP
Sbjct: 52 SDVTVAETPAVKTPTKAPKAPKSKTTKEPK--AKVAAAHPPFINMVTAAATKKPVAKKPV 109
Query: 471 APAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAP 641
A G+K +AK + AK+P + P AK +K+AAP
Sbjct: 110 AKKAATGEKKAKKTTVAK------KTGDKVKKAKSPKKIAKPAAKKVAKSPAKKAAP 160
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
Frame = +3
Query: 345 QNPWTPTKRRGPIAAEAS-SPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIA 521
++P P R+ E P V PS + KPPP + RA + Q+++
Sbjct: 449 KSPTPPPLRKLEQCTELPPKPRKMVSRSPSPVNKPPPSPKVSRATSPKKSQQVEDSTQTT 508
Query: 522 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAP 641
+ TE A P S PV E + +K P
Sbjct: 509 QLSAETRPTQTEKPIAPVPPPISSIPVRKEMETQTKTPPP 548
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 30.7 bits (66), Expect = 1.4
Identities = 38/139 (27%), Positives = 49/139 (35%)
Frame = +3
Query: 384 AAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGM 563
AAEA++ A S+P P P + + APA P A A P PA+ T
Sbjct: 535 AAEAAAGYDAPSSVPEETPAPAPAADETPAPA--------PAAEETPA-PAPAAEETPAP 585
Query: 564 TAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTK 743
A T P A E + APA T + + P P T A A+ +
Sbjct: 586 APAAEET----PATAPAAEETPAPAPAADETPAPAPAAEETPAPAPAVEETPAPAPAVEE 641
Query: 744 RPPAFTMAPRRELKPPTAA 800
P A P AA
Sbjct: 642 TPAPAPAAEETPAPAPAAA 660
Score = 28.3 bits (60), Expect = 7.7
Identities = 27/91 (29%), Positives = 37/91 (40%)
Frame = +3
Query: 378 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 557
P+A E +P PA P+ P + + APA ++ A A+ P PA E
Sbjct: 665 PVAEETPAPAPAAEETPA----PAQAAEETPAPA-PAAEETPASAPAAEETPAPAP-AAE 718
Query: 558 GMTAKAPNTYSMPPVLGEAKEGSKRAAPAFS 650
A AP + P A EG+ AP S
Sbjct: 719 EAPAPAP---AAPETPAPAAEGAAAPAPIVS 746
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 378 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 482
P+ + P PAV + KPPPE +P+ P F
Sbjct: 158 PVEPSPAPPVPAVPAAVEQEWKPPPEFERPKHPGF 192
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +3
Query: 405 GPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 539
GPA V L +I PP P P FG P A I GP P
Sbjct: 73 GPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAPIIVNGPPP 117
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 426 PSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 539
P + PPP P P FG PLA I GP P
Sbjct: 52 PIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPP 89
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.3 bits (65), Expect = 1.9
Identities = 33/147 (22%), Positives = 54/147 (36%)
Frame = +3
Query: 360 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 539
P +RR +A S P P PS P P+ P A ++ P A +K+ P P
Sbjct: 372 PARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPA-----RRRRSPSA--SKSPPAP 424
Query: 540 ASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTD 719
+ + AP P ++ +R +P+ S + G
Sbjct: 425 KRAKSRSKSPPAPRR-RRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRS 483
Query: 720 RAAAALTKRPPAFTMAPRRELKPPTAA 800
AAA ++ P +PRR P +++
Sbjct: 484 PAAAPRRRQSPQRRRSPRRRRSPSSSS 510
Score = 28.7 bits (61), Expect = 5.8
Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 4/156 (2%)
Frame = +3
Query: 360 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 539
P RR +++ SP P S PP +R+ R+P+ + + P AK+
Sbjct: 315 PPARRRRSPSQSKSPAPKRAKSRSK--SPPAPARRRRSPSAS--KSPPPAPKRAKS---- 366
Query: 540 ASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA----FSITGRGKFSEAKGLMPGPGT 707
S + ++P+ PP + SK +PA R + A P P
Sbjct: 367 RSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAP-- 424
Query: 708 YTTDRAAAALTKRPPAFTMAPRRELKPPTAAVPGSR 815
+ A + +K PP APRR P + P R
Sbjct: 425 ----KRAKSRSKSPP----APRRRRSPSQSKSPAPR 452
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 381 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLAN-IAKAGPGPASYNTE 557
+AA A +P P V + P+L P APAF P+A+ + A P A+ +
Sbjct: 75 LAAPAFAPAPVVAAAPALAPAYAPAPVVAAAPAFAPAYAPAPVASPMIAAAPALAAASIN 134
Query: 558 GM-TAKAP 578
G+ A AP
Sbjct: 135 GLPVAAAP 142
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 339 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE---SRKPRAPAFTFGQKLDPL 509
++Q+ R G + AE + P VS+P G PP + S + RA T Q+ +P
Sbjct: 206 LQQHQQQQQNRAGQLQAEQAFANPPTVSIPPQTGHPPQQTSASSQQRAQE-TMAQQTEPQ 264
Query: 510 ANIAKA 527
++I ++
Sbjct: 265 SHIRES 270
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Frame = +3
Query: 306 KQSISCETPMGVRQNPWTPTKRRGPIAA-----EASSPGPAVVSLPSLIGKPPPESRKPR 470
+ S S + R +P T P AA E +P PA S P+ + P P P+
Sbjct: 32 RSSRSTRSTKSSRSSPKTVPVTEQPAAAPPQQLEQPTPAPAPESAPAPVQCPEPTPEVPQ 91
Query: 471 APAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAP 578
P Q P+ I + P P T +TA+ P
Sbjct: 92 QPT----QVSAPVQEITQGAPAPIPEPTP-VTAEQP 122
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Frame = +3
Query: 267 RKSGLTHASSLLVKQSISCETPMGVRQNPWTPTKRRGP--------IAAEASSPGPAVVS 422
R SGL A S + +S + R PW P R+GP + G A +
Sbjct: 31 RDSGLNRAGSGSGGRPVSSTSNESWRNVPWGPPGRQGPAVHQHHQMVQVHTRRLGGAAPT 90
Query: 423 LPSLIGKPPPESRKPRAP 476
+ PPP R+P +P
Sbjct: 91 MHHSRPPPPPLDRRPMSP 108
>Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical
protein M163.3 protein.
Length = 208
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 402 PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPN 581
P A + K P ++KP A G+K AK A+ + + AK+P
Sbjct: 112 PEKAAAAKKPAAAKKPAAAKKPAAAKKATGEKKAKKPAAAKPKKA-ATGDKKVKKAKSPK 170
Query: 582 TYSMPPVLGEAKEGSKRAAP 641
+ P AK +K+AAP
Sbjct: 171 KVAKPAAKKVAKSPAKKAAP 190
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = +3
Query: 360 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP-AFTFGQKLDPLANIAKAGPG 536
P + P A +S P +P+ PP +AP A QK + +A P
Sbjct: 351 PPRATAPPKAAPASKAPTRAPIPARSAPAPPRGAPAKAPKAEPIAQK-KVAGKVQRAAPS 409
Query: 537 PASYNTEGMTAKAPNTYSMPPVLGEAKEGSKR 632
+ A AP + S P A E S+R
Sbjct: 410 KPASAVSAPKATAPASTSSAP--ATAPEASRR 439
>X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1
protein.
Length = 208
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 402 PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPN 581
P A + K P ++KP A G+K AK A+ + + AK+P
Sbjct: 112 PEKAAAAKKPAAAKKPAAAKKPAAAKKATGEKKAKKPAAAKPKKA-ATGDKKVKKAKSPK 170
Query: 582 TYSMPPVLGEAKEGSKRAAP 641
+ P AK +K+AAP
Sbjct: 171 KVAKPAAKKVAKSPAKKAAP 190
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 29.1 bits (62), Expect = 4.4
Identities = 39/157 (24%), Positives = 55/157 (35%), Gaps = 2/157 (1%)
Frame = +3
Query: 327 TPMGVRQNPWTPTKRRGPIAAEA-SSPGPAVVSLPSLIGKPPPESRKPRA-PAFTFGQKL 500
TP+ W P + E P PA +P+L K P S KP + P+ T K
Sbjct: 203 TPIKNPAKKWKPPWEDDEVPTEEIKEPEPATRKVPALKKKEPSTSVKPVSDPSPT---KK 259
Query: 501 DPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEA 680
P+ + P P T+ K P P + E KE A + + A
Sbjct: 260 VPVKKEPEVPPTPIKNPTKKW--KPPWEDETP--VEEVKEPPVPEKKAPVLKKKDPAPAA 315
Query: 681 KGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPP 791
K P P + + PP P ++ KPP
Sbjct: 316 KARDPSPSKAAPKKVEPSSPVVPPTPVKNPVKKYKPP 352
>AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1
protein.
Length = 208
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +3
Query: 402 PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPN 581
P A + K P ++KP A G+K AK A+ + + AK+P
Sbjct: 112 PEKAAAAKKPAAAKKPAAAKKPAAAKKATGEKKAKKPAAAKPKKA-ATGDKKVKKAKSPK 170
Query: 582 TYSMPPVLGEAKEGSKRAAP 641
+ P AK +K+AAP
Sbjct: 171 KVAKPAAKKVAKSPAKKAAP 190
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/80 (30%), Positives = 31/80 (38%)
Frame = +3
Query: 537 PASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTT 716
P SY T AP TY PP + S PA S+ FS+ + + YTT
Sbjct: 36 PPSYPTPKKYPVAP-TYPSPPAYAQKPSYSAPPPPAPSVYSSSSFSDNE--VASDSEYTT 92
Query: 717 DRAAAALTKRPPAFTMAPRR 776
+ KR A T R+
Sbjct: 93 ASPNSEYRKRAKARTAHNRK 112
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +3
Query: 345 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 524
+ P T P + + P P S P + P ES+ P T +DP+ +
Sbjct: 575 EEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDPVTEASP 634
Query: 525 AGPGP 539
P P
Sbjct: 635 LNPQP 639
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 28.3 bits (60), Expect = 7.7
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 6/126 (4%)
Frame = +3
Query: 408 PAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTY 587
P V LP+ P +SR PRAP P+ ++ G PAS + T +P
Sbjct: 360 PPVARLPNSATFPTEKSRLPRAPP---PAVTTPVPRMS-IGSLPASSSNVPRTMSSP--V 413
Query: 588 SMPPVLGEAKEGSKRAAPAFSIT--GRGKFSEAKGLMP-GPGTYTTDRAAAAL---TKRP 749
PV+G + +R A + T + +MP P + A ++ T P
Sbjct: 414 KKTPVMGVSSTAVRRPQSAATTTMPTTSVITNTSAVMPLSPDLEQLEAAIQSMNVVTASP 473
Query: 750 PAFTMA 767
PA++ A
Sbjct: 474 PAYSTA 479
>U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical
protein SSSD1.1 protein.
Length = 636
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 702 GTYTTD-RAAAALTKRPPAFTMAPRRELK 785
G YT + + +A T +PP FT+AP E+K
Sbjct: 192 GWYTCEAKNSAGETTKPPVFTVAPPSEIK 220
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 378 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 479
P A A + P V P + PPP + P APA
Sbjct: 353 PTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPA 386
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -1
Query: 461 PRFWRRFTYKGRE---RYYGW 408
PR W + T KGRE R YGW
Sbjct: 645 PRHWNKLTDKGREAFRRIYGW 665
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,081,792
Number of Sequences: 27780
Number of extensions: 461796
Number of successful extensions: 1527
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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