Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_N11
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    38   0.008
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    38   0.015
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    37   0.026
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    35   0.078
04_04_0795 - 28111155-28111649,28111747-28112405,28112499-281126...    29   3.9  

>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 22/55 (40%), Positives = 32/55 (58%)
 Frame = +1

Query: 175 VSPTLKNXKALPTYAQLLNLYAHFXQATXGDADPANRPGLLDLKGKAKFDAWHKL 339
           V+ +  +  ++P  AQL  LY  +  AT G    A +P  L LK +AK++AWHKL
Sbjct: 101 VAASAASGTSVPEQAQL-QLYGLYKIATEGPCT-APQPSALKLKARAKWNAWHKL 153


>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +1

Query: 226 LNLYAHFXQATXGDADPANRPGLLDLKGKAKFDAWHKLAG 345
           L LY  + QAT GD + A RPG+   + +AK+DAW  + G
Sbjct: 27  LILYGLYKQATVGDVNTA-RPGIFAQRDRAKWDAWKAVEG 65


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 36.7 bits (81), Expect = 0.026
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +1

Query: 226 LNLYAHFXQATXGDADPANRPGLLDLKGKAKFDAWHKLAG 345
           L LY  + QAT GD +  +RPG+   + +AK+DAW  + G
Sbjct: 27  LILYGLYKQATVGDVN-TSRPGIFAQRDRAKWDAWKAVEG 65


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 35.1 bits (77), Expect = 0.078
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +1

Query: 226 LNLYAHFXQATXGDADPANRPGLLDLKGKAKFDAWHKLAG 345
           L LY  + QAT G      RPG+ +LK + K+DAW  + G
Sbjct: 27  LLLYGLYKQATVGPVT-TGRPGIFNLKDRYKWDAWKAVEG 65


>04_04_0795 -
           28111155-28111649,28111747-28112405,28112499-28112635,
           28112747-28113093
          Length = 545

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = -3

Query: 317 LALPFKSRRPGLLAGSASPXV---ACXKWAYKLRSWA*VGRAFXFFNVGLTGVGLNF 156
           +ALPF S   GLL G + P      C  W   +R        +  + +G  G+GL+F
Sbjct: 463 VALPFLSELAGLLGGISLPVTLAYPCFMWVAIMRPAKGTAMWYTNWGLGSLGMGLSF 519


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,446,516
Number of Sequences: 37544
Number of extensions: 318734
Number of successful extensions: 497
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)