Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_N11
         (916 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    55   8e-08
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    38   0.010
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    36   0.031
Z81552-2|CAB04485.1|  331|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z81552-1|CAB04484.1|  331|Caenorhabditis elegans Hypothetical pr...    28   8.1  
X94702-1|CAA64363.1|  331|Caenorhabditis elegans pes-2 protein.        28   8.1  
X94701-1|CAA64362.1|  331|Caenorhabditis elegans pes-2 protein.        28   8.1  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 26/54 (48%), Positives = 35/54 (64%)
 Frame = +1

Query: 184 TLKNXKALPTYAQLLNLYAHFXQATXGDADPANRPGLLDLKGKAKFDAWHKLAG 345
           T+K  K  P+  +LL LYA F Q T GD +  ++PG+ DLKGKAK+ AW +  G
Sbjct: 11  TVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63



 Score = 32.7 bits (71), Expect = 0.38
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 347 LSKEDAQKAYIEIVEGLIASIG 412
           L+K+DAQKAY+ +VE LIA  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/53 (47%), Positives = 30/53 (56%)
 Frame = +1

Query: 187 LKNXKALPTYAQLLNLYAHFXQATXGDADPANRPGLLDLKGKAKFDAWHKLAG 345
           LK  K  P     L LY  F QAT GD     RPG++D  G+AK+DAW+ L G
Sbjct: 36  LKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKG 87


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +1

Query: 226 LNLYAHFXQATXGDADPANRPGLLDLKGKAKFDAWHKL 339
           LN YA F QAT G  D   +P   D++G  K++AW+KL
Sbjct: 28  LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKL 64


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +1

Query: 220 QLLNLYAHFXQATXGDADPANRPGLLDLKGKAKFDAWHKLAG 345
           Q L  Y+ F QA+ GD +  +RPG+  +  + K+D+W +L G
Sbjct: 29  QKLTFYSLFKQASIGDVN-TDRPGIFSIIERKKWDSWKELEG 69


>Z81552-2|CAB04485.1|  331|Caenorhabditis elegans Hypothetical
           protein F56G4.3 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 323 TLGTNWPALSKEDAQKAYIEIVEGLIASIGLKE 421
           T+   WP   KED   A +++ E  I ++GL E
Sbjct: 105 TINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGE 137


>Z81552-1|CAB04484.1|  331|Caenorhabditis elegans Hypothetical
           protein F56G4.2 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 323 TLGTNWPALSKEDAQKAYIEIVEGLIASIGLKE 421
           T+   WP   KED   A +++ E  I ++GL E
Sbjct: 105 TINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGE 137


>X94702-1|CAA64363.1|  331|Caenorhabditis elegans pes-2 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 323 TLGTNWPALSKEDAQKAYIEIVEGLIASIGLKE 421
           T+   WP   KED   A +++ E  I ++GL E
Sbjct: 105 TINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGE 137


>X94701-1|CAA64362.1|  331|Caenorhabditis elegans pes-2 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 323 TLGTNWPALSKEDAQKAYIEIVEGLIASIGLKE 421
           T+   WP   KED   A +++ E  I ++GL E
Sbjct: 105 TINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGE 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,164,911
Number of Sequences: 27780
Number of extensions: 284484
Number of successful extensions: 601
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)