Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_N09
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   107   9e-24
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   105   5e-23
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   105   7e-23
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   101   6e-22

>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  107 bits (258), Expect = 9e-24
 Identities = 49/89 (55%), Positives = 61/89 (68%)
 Frame = +3

Query: 336 LXKYMSSGPVVPMVWEGLNVVXTGRHMLGATNPXDSXPGTIRXDLCIQVGRNIIHGSDSV 515
           L +Y+ SGPVV MVWEG  VV TGR ++GATNP  + PGTIR D  + +GRN+IHGSDSV
Sbjct: 63  LVEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSV 122

Query: 516 ESAXKEIGLWFTDXEVVGWTPATXNXVYE 602
           E+A KEI LWF +  +  W       +YE
Sbjct: 123 ENARKEIALWFPEG-IAEWRSNQHPWIYE 150



 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = +2

Query: 170 IMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPG 334
           IM+KPDGVQRGL+G +I RFEKKGF L  +K +   +   ++HY+DL+S+PFF G
Sbjct: 8   IMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGG 62


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  105 bits (252), Expect = 5e-23
 Identities = 48/88 (54%), Positives = 60/88 (68%)
 Frame = +3

Query: 336 LXKYMSSGPVVPMVWEGLNVVXTGRHMLGATNPXDSXPGTIRXDLCIQVGRNIIHGSDSV 515
           L  ++SSGPV+ MVWEG  V+  GR ++GAT+P  S PGTIR DL + VGRNIIHGSD  
Sbjct: 105 LCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 164

Query: 516 ESAXKEIGLWFTDXEVVGWTPATXNXVY 599
           E+A  EIGLWF   E+V +T      +Y
Sbjct: 165 ETAKAEIGLWFEPRELVSYTSNEEKWIY 192



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 35/55 (63%), Positives = 42/55 (76%)
 Frame = +2

Query: 170 IMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPG 334
           I +KPDGVQRGL+  I+ RFE+KGFKLV +K V PS+E  Q+HY DL  RPFF G
Sbjct: 50  IAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPFFNG 104


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  105 bits (251), Expect = 7e-23
 Identities = 47/89 (52%), Positives = 62/89 (69%)
 Frame = +3

Query: 336 LXKYMSSGPVVPMVWEGLNVVXTGRHMLGATNPXDSXPGTIRXDLCIQVGRNIIHGSDSV 515
           L +Y+ SGPVV MVWEG +VV TGR ++GAT P ++ PGTIR D  ++VGRN+IHGSDSV
Sbjct: 61  LVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSV 120

Query: 516 ESAXKEIGLWFTDXEVVGWTPATXNXVYE 602
           ++  KEI LWF +  +  W       +YE
Sbjct: 121 DNGKKEIALWFPEG-LAEWRSNLHPWIYE 148



 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 36/55 (65%), Positives = 43/55 (78%)
 Frame = +2

Query: 170 IMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPG 334
           IM+KPDGVQRGL+G II RFEKKGF L G+KF+       QQHY+DL+ +PFFPG
Sbjct: 6   IMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPG 60


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  101 bits (243), Expect = 6e-22
 Identities = 42/79 (53%), Positives = 57/79 (72%)
 Frame = +3

Query: 336 LXKYMSSGPVVPMVWEGLNVVXTGRHMLGATNPXDSXPGTIRXDLCIQVGRNIIHGSDSV 515
           L +Y++SGPVV M WEG  VV + R ++GATNP  + PGTIR DL +Q GRN++HGSDS 
Sbjct: 62  LIEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSP 121

Query: 516 ESAXKEIGLWFTDXEVVGW 572
           ++  +EI LWF + E+  W
Sbjct: 122 DNGKREIALWFKEGELCEW 140



 Score = 82.2 bits (194), Expect = 5e-16
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = +2

Query: 170 IMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPG 334
           IM+KPDGVQRGLVG II RFEKKGF L GLK     ++L Q+HY DL  +PFFPG
Sbjct: 7   IMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPG 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,058,797
Number of Sequences: 37544
Number of extensions: 276266
Number of successful extensions: 538
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)