Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_N09
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   115   4e-26
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    54   1e-07

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  115 bits (277), Expect = 4e-26
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = +3

Query: 333 ALXKYMSSGPVVPMVWEGLNVVXTGRHMLGATNPXDSXPGTIRXDLCIQVGRNIIHGSDS 512
           +L +YMSSGPVV MVW+GL+VV  GR MLGATNP  S PGTIR D CIQ GRNI HGSD+
Sbjct: 63  SLIEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDA 122

Query: 513 VESAXKEIGLWFTDXEVVGW-TPATXNXVYE 602
           V+SA +EI  WF   E+  + +P   + VYE
Sbjct: 123 VDSANREIAHWFKQEEINDYASPFINSWVYE 153



 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 32/54 (59%), Positives = 40/54 (74%)
 Frame = +2

Query: 170 IMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFP 331
           I +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP
Sbjct: 9   IAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFP 62


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 32/73 (43%), Positives = 40/73 (54%)
 Frame = +3

Query: 336 LXKYMSSGPVVPMVWEGLNVVXTGRHMLGATNPXDSXPGTIRXDLCIQVGRNIIHGSDSV 515
           L  YMSSGPVV M+WEG +VV   R +LG          +I  DL ++      H SDSV
Sbjct: 39  LIDYMSSGPVVAMLWEGCDVVKRARVILGEELEVGEF-RSIFYDLVVRDTHKGCHCSDSV 97

Query: 516 ESAXKEIGLWFTD 554
            SA +E  LWF +
Sbjct: 98  ASANREYVLWFEE 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,421,372
Number of Sequences: 27780
Number of extensions: 239357
Number of successful extensions: 546
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)