Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_N08
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 77 1e-14
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 77 1e-14
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 77 1e-14
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 77 1e-14
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 77 1e-14
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 77 1e-14
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 70 2e-12
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 70 2e-12
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 69 6e-12
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 69 6e-12
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 67 1e-11
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 67 1e-11
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 65 6e-11
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 65 6e-11
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 31 1.4
U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z50177-2|CAA90544.1| 336|Caenorhabditis elegans Hypothetical pr... 29 5.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 5.8
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 28 7.7
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
A++IN++V ENT + IK ++ DS++S AVL NA+YFK +
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
A++IN++V ENT + IK ++ DS++S AVL NA+YFK +
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
A++IN++V ENT + IK ++ DS++S AVL NA+YFK +
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
A++IN++V ENT + IK ++ DS++S AVL NA+YFK +
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
A++IN++V ENT + IK ++ DS++S AVL NA+YFK +
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
A++IN++V ENT + IK ++ DS++S AVL NA+YFK +
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQ 169
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/89 (37%), Positives = 58/89 (65%)
Frame = +2
Query: 404 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNR 583
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 584 IKDLVNPDSLSSATAAVLVNAIYFKGSME 670
IKDL+ DS ++A A LVNA+YFK +
Sbjct: 137 IKDLIPADSANNA-FAFLVNAMYFKADWQ 164
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 597 LIRTRSAQPQRLFSSTPSISRGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK-Y 773
LI SA F + W SKF + T+ R+F+ S+ ++ ++P + +++ Y
Sbjct: 140 LIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDY 199
Query: 774 GESAVLNAQLIEIXYKGXQSSLIVXLXKTXMAL 872
E + Q++ + Y + +L + L K L
Sbjct: 200 TEDVLF--QVLSLKYADPKFTLAIFLPKQRFGL 230
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/89 (37%), Positives = 58/89 (65%)
Frame = +2
Query: 404 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNR 583
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 584 IKDLVNPDSLSSATAAVLVNAIYFKGSME 670
IKDL+ DS ++A A LVNA+YFK +
Sbjct: 137 IKDLIPADSANNA-FAFLVNAMYFKADWQ 164
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 597 LIRTRSAQPQRLFSSTPSISRGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK-Y 773
LI SA F + W SKF + T+ R+F+ S+ ++ ++P + + +++ Y
Sbjct: 140 LIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDY 199
Query: 774 GESAVLNAQLIEIXYKGXQSSLIVXLXKTXMAL 872
E + Q++ + Y + +L + L K L
Sbjct: 200 TEDVLF--QVLSLKYADPKFTLAIFLPKQRFGL 230
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 68.5 bits (160), Expect = 6e-12
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLR-SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + F++ S L + KG E+ +AN ++ + + + + ++N+ ++F
Sbjct: 70 DEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFE 129
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
+A++IN++V ENT IK ++NPDS+S AVL NA YFK + +
Sbjct: 130 DQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQ 178
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 666 WSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGESAVLNAQLIEIXYKGXQSSLI 842
W +KF + T R+F+ S++ + ++ R + KY E+ Q++ + YK +L
Sbjct: 177 WQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYKDTSFALS 234
Query: 843 VXLXKTXMAL 872
+ L KT L
Sbjct: 235 IFLPKTRFGL 244
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 68.5 bits (160), Expect = 6e-12
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLR-SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + F++ S L + KG E+ +AN ++ + + + + ++N+ ++F
Sbjct: 70 DEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFE 129
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
+A++IN++V ENT IK ++NPDS+S AVL NA YFK + +
Sbjct: 130 DQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQ 178
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 666 WSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGESAVLNAQLIEIXYKGXQSSLI 842
W +KF + T R+F+ S++ + ++ R + KY E+ Q++ + YK +L
Sbjct: 177 WQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYKDTSFALS 234
Query: 843 VXLXKTXMAL 872
+ L KT L
Sbjct: 235 IFLPKTRFGL 244
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/89 (34%), Positives = 55/89 (61%)
Frame = +2
Query: 395 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 574
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 575 NNRIKDLVNPDSLSSATAAVLVNAIYFKG 661
+I D++ PD+L A+L+NAI+F+G
Sbjct: 144 KGKIPDMIKPDNLKDVD-AILINAIFFQG 171
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/89 (34%), Positives = 55/89 (61%)
Frame = +2
Query: 395 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 574
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 575 NNRIKDLVNPDSLSSATAAVLVNAIYFKG 661
+I D++ PD+L A+L+NAI+F+G
Sbjct: 144 KGKIPDMIKPDNLKDVD-AILINAIFFQG 171
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 65.3 bits (152), Expect = 6e-11
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +2
Query: 329 LSASLXDDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDV 505
L + D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D
Sbjct: 54 LLSGATDEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADA 113
Query: 506 QNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
+++D + A + IN +V TN +IK++ DS+ A A+L+N+IYFK +
Sbjct: 114 KSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDA-IALLINSIYFKADWD 166
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 65.3 bits (152), Expect = 6e-11
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +2
Query: 329 LSASLXDDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDV 505
L + D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D
Sbjct: 54 LLSGATDEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADA 113
Query: 506 QNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 670
+++D + A + IN +V TN +IK++ DS+ A A+L+N+IYFK +
Sbjct: 114 KSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDA-IALLINSIYFKADWD 166
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 639 STPSISRGAWSSKFDERLTSDRD 707
STP+ SR W S DE LT D D
Sbjct: 87 STPNNSRSNWRSDMDEELTDDED 109
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 669 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAV 788
S +FD+ L +D Y +KD+ ++ R D++Y A+
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDAI 687
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 669 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAV 788
S +FD+ L +D Y +KD+ ++ R D++Y A+
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDAI 179
>U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical
protein R151.1 protein.
Length = 377
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 675 KFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGES---AVLNAQLIEIXYKGXQSS 836
KFDE + FYV + I +P++ K+G E + NA EI K ++S
Sbjct: 143 KFDEMKGREYQFYVDVYERIAMPLIKKKGSEPESEEYTFRIANADSYEISAKSAETS 199
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 124 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSIVLSAFSVLPPLAQLALAS 297
+A+ ++ + N+L+N G D+ R V+ +NN KSI + F +P L L L+
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183
Query: 298 DGET 309
+ T
Sbjct: 184 NNMT 187
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -1
Query: 213 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHVCGLRLSNVKTQ 61
FG + GC+ I + ++ DG CHCRDG D + +C+ + +N TQ
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQ 4144
>Z50177-2|CAA90544.1| 336|Caenorhabditis elegans Hypothetical
protein F46G10.4 protein.
Length = 336
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 440 HDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 619
+ GG+L F V D + ID S NTV+ +N + + N +D+V P +
Sbjct: 106 NSGGQLLSEFGVGLEDY--AAYTEIDGSNNTVSVGHVNVYFLDAMNQMWEDMVQPSIKNR 163
Query: 620 ATAAVLVNAIYFKGSM 667
L+ G+M
Sbjct: 164 QNYTFLITGHSLGGAM 179
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -1
Query: 213 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHVCGLRLSNVKTQ 61
FG + GC+ I + ++ DG CHCRDG D + +C+ + +N TQ
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQ 4144
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 168 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 70
H ++ G H DG K+ N C GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179
>Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical
protein R01H10.6 protein.
Length = 361
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = +3
Query: 483 GTSSIRTSKILISRRIQSQLSLLTIG*KKIPITALRI*LIRTRSAQPQRLFSSTPSISRG 662
G S +T+ ++ R S ++ + T T A +LF++ SISR
Sbjct: 80 GVQSKQTTSLVTRNRGISNEAIYVLAKVSATTTKFEFIFTTTNPASHSKLFNTISSISRA 139
Query: 663 AWSSKFDERLTSDRDFYVSKDKTIKV 740
++K L R ++ +D T+K+
Sbjct: 140 YETTKMYRELKM-RGVFIREDGTLKI 164
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 776 SIFIIAAFIHHGYFDCFVFAHVEVTVTGQSL 684
SI +AFI H +F+CF F E V+ S+
Sbjct: 172 SIIFTSAFILHVFFECFAFGIQEDAVSVTSI 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,850,654
Number of Sequences: 27780
Number of extensions: 355372
Number of successful extensions: 1093
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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