Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_N07
(875 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0546 + 4024793-4025025,4026259-4026372,4026482-4026577,402... 125 5e-29
10_08_1050 - 22559518-22559613,22559736-22559846,22559966-225600... 116 2e-26
10_07_0037 - 12239296-12239367,12239484-12239606,12239699-122397... 61 1e-09
08_01_0784 + 7600691-7601055,7601530-7601765,7601896-7602068,760... 61 1e-09
11_01_0129 - 1073002-1073073,1073463-1073585,1073667-1073732,107... 54 1e-07
08_01_0407 - 3613417-3613506,3613603-3613713,3613789-3613857,361... 50 2e-06
02_01_0270 + 1793776-1793943,1794233-1794308,1795400-1795407,179... 29 4.9
06_01_0673 - 4908496-4908563,4908646-4908712,4908821-4908922,490... 29 6.5
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 29 6.5
03_01_0052 - 450258-450285,450345-450457,450540-450746,451021-45... 28 8.5
>02_01_0546 +
4024793-4025025,4026259-4026372,4026482-4026577,
4026780-4026822,4026958-4027098,4027235-4027315,
4028032-4028130,4028225-4028350
Length = 310
Score = 125 bits (301), Expect = 5e-29
Identities = 51/73 (69%), Positives = 64/73 (87%)
Frame = +1
Query: 529 GRKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERY 708
GR +RVY+DGIYD+FH GHA+ L+QAK +FPN YL+VG C+D+LTH KGRTVMTEDERY
Sbjct: 50 GRPIRVYADGIYDLFHFGHAKSLEQAKRLFPNTYLLVGCCNDELTHKYKGRTVMTEDERY 109
Query: 709 EAVRHCXYVDEVV 747
E++RHC +VDEV+
Sbjct: 110 ESLRHCKWVDEVI 122
>10_08_1050 -
22559518-22559613,22559736-22559846,22559966-22560034,
22560172-22560327,22560416-22560458,22560566-22560661,
22561136-22561249,22561390-22561574
Length = 289
Score = 116 bits (280), Expect = 2e-26
Identities = 48/72 (66%), Positives = 63/72 (87%)
Frame = +1
Query: 532 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 711
R VRVY+DGI+D+FH GHAR L+QAK +FPN YL+VG C+D+LT+ KG+TVMT+DERYE
Sbjct: 35 RPVRVYADGIFDLFHFGHARALEQAKLLFPNTYLLVGCCNDELTNRYKGKTVMTQDERYE 94
Query: 712 AVRHCXYVDEVV 747
++RHC +VDEV+
Sbjct: 95 SLRHCKWVDEVI 106
>10_07_0037 -
12239296-12239367,12239484-12239606,12239699-12239758,
12239892-12240009,12240133-12240200,12240307-12240378,
12240677-12240834,12240964-12241199,12241643-12242007
Length = 423
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +1
Query: 532 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 711
R VRVY DG +D+ H GHA L+QAK + L+VGV SD+ + KG V++ +ER
Sbjct: 67 RPVRVYMDGCFDLMHYGHANALRQAKLL--GDQLVVGVVSDEEIVANKGPPVLSMEERLT 124
Query: 712 AVRHCXYVDEVV 747
V +VDEV+
Sbjct: 125 LVSGLKWVDEVI 136
Score = 57.2 bits (132), Expect = 2e-08
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 517 AGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKG-RTVMT 693
A + G +V VY DG +D+FH GH L+ A+ + +L+VGV DQ R+G R +M
Sbjct: 254 APSPGARV-VYIDGAFDLFHAGHVEILRSARQL--GDFLLVGVHDDQAIRDRRGYRPIMH 310
Query: 694 EDERYEAVRHCXYVDEVV 747
ER +V C YVDEV+
Sbjct: 311 LHERTLSVLACRYVDEVI 328
>08_01_0784 +
7600691-7601055,7601530-7601765,7601896-7602068,
7602344-7602430,7602538-7602605,7602732-7602849,
7602983-7603042,7603135-7603257,7603377-7603448
Length = 433
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +1
Query: 532 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 711
R VRVY DG +D+ H GHA L+QAK + L+VGV SD+ + KG V++ +ER
Sbjct: 67 RPVRVYMDGCFDLMHYGHANALRQAKLL--GDQLVVGVVSDEEIVANKGPPVLSMEERLT 124
Query: 712 AVRHCXYVDEVV 747
V +VDEV+
Sbjct: 125 LVSGLKWVDEVI 136
Score = 56.4 bits (130), Expect = 3e-08
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 544 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKG-RTVMTEDERYEAVR 720
VY DG +D+FH GH L+ A+ + +L+VGV DQ R+G R +M ER +V
Sbjct: 272 VYIDGAFDLFHAGHVEILRSARQL--GDFLLVGVHDDQAIRDRRGYRPIMHLHERTLSVL 329
Query: 721 HCXYVDEVV 747
C YVDEV+
Sbjct: 330 ACRYVDEVI 338
>11_01_0129 -
1073002-1073073,1073463-1073585,1073667-1073732,
1074227-1074347,1074536-1074603,1074792-1074863,
1076045-1076222,1077554-1077888
Length = 344
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 544 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKG--RTVMTEDERYEAV 717
VY DG +D+FH GH L+ A+ + +L+VG+ +DQ S +G R +M ER +V
Sbjct: 180 VYIDGAFDLFHAGHVEILRLAREL--GDFLLVGIHTDQTISSTRGPHRPIMNLHERSLSV 237
Query: 718 RHCXYVDEVV 747
C YVDEV+
Sbjct: 238 LACRYVDEVI 247
Score = 54.0 bits (124), Expect = 2e-07
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +1
Query: 532 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 711
R VRVY DG +DM H GH L+QA+ + LIVGV SD + KG V ER
Sbjct: 57 RPVRVYMDGCFDMMHYGHCNALRQARALGDE--LIVGVVSDHEITANKGPPVTPLHERLI 114
Query: 712 AVRHCXYVDEVV 747
VR +V +V+
Sbjct: 115 MVRAVKWVHDVI 126
>08_01_0407 -
3613417-3613506,3613603-3613713,3613789-3613857,
3613936-3614091,3614156-3614222,3614375-3614470,
3614976-3615142
Length = 251
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +1
Query: 529 GRKVRVYSDGIYDMFHQGHARQLQQAK 609
GR VRVY+DGIYD+FH GHAR L+QAK
Sbjct: 28 GRPVRVYADGIYDLFHFGHARALEQAK 54
>02_01_0270 +
1793776-1793943,1794233-1794308,1795400-1795407,
1795778-1795837,1796300-1796421,1796613-1796685,
1796777-1796926
Length = 218
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 520 GTAGRK-VRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVC 648
G+ GR+ V G +D HQGH L +A F +++G+C
Sbjct: 29 GSGGRQYAAVVVGGTFDRLHQGHHLFL-KAAAEFARERIVIGIC 71
>06_01_0673 -
4908496-4908563,4908646-4908712,4908821-4908922,
4909006-4909119,4909510-4909683,4909769-4910200,
4910855-4911295
Length = 465
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 502 RAAALAGTAGRKVRVYSDGIYDMFHQGHAR 591
RA L GT + V+SDG+ ++ +GH +
Sbjct: 152 RAGVLVGTGMGGLTVFSDGVQNLIEKGHRK 181
>01_06_0864 - 32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 133 DENIDVCYVTLLKQHFDSFGN-FTFVITVKYNARTFFDIVLDIQK 264
D + VC+ + KQH D +G F F+I + T DI + IQK
Sbjct: 959 DRLVHVCHFIIEKQHIDYYGEPFFFLIR---DGETLSDIKVRIQK 1000
>03_01_0052 -
450258-450285,450345-450457,450540-450746,451021-451080,
451281-451376,451495-451551,451786-451845,452774-452853,
454265-454367,454530-454571
Length = 281
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 178 NVASAMSRSKRQCFRPINALNLKVKRVIN*MSETSVTL 65
N + +SKR CF + A+ L ++ +S+ S+TL
Sbjct: 88 NEGHQLLQSKRACFPKLEAIKLATADILTGLSKNSITL 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,601,201
Number of Sequences: 37544
Number of extensions: 350062
Number of successful extensions: 974
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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