Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_N07
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29378-8|ABA54423.1|  354|Caenorhabditis elegans Hypothetical pr...   131   6e-31
U29378-7|AAA68722.2|  362|Caenorhabditis elegans Hypothetical pr...   131   6e-31
AC024751-2|AAN39663.1|  272|Caenorhabditis elegans Hypothetical ...   122   4e-28
AC006632-3|AAK85467.1|  183|Caenorhabditis elegans Hypothetical ...   115   4e-26
AC087079-11|AAK27869.1|  370|Caenorhabditis elegans Hypothetical...    65   5e-11
U39678-4|AAK39211.2|  330|Caenorhabditis elegans Hypothetical pr...    48   9e-06
U39678-5|ABP49528.1|  213|Caenorhabditis elegans Hypothetical pr...    42   8e-04
Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p...    28   7.6  
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.        28   7.6  

>U29378-8|ABA54423.1|  354|Caenorhabditis elegans Hypothetical
           protein F08C6.2b protein.
          Length = 354

 Score =  131 bits (317), Expect = 6e-31
 Identities = 60/101 (59%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = +1

Query: 445 STDPMALAERDSCHYGR-IPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFP 621
           S + +A+  R++  Y + I  A A A  AGR VR+Y+DGIYD+FH GHA QL+Q K +FP
Sbjct: 41  SDEALAITTREAVDYSKKITLAMAEANEAGRPVRIYADGIYDLFHHGHANQLRQVKKMFP 100

Query: 622 NVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCXYVDEV 744
           NVYLIVGVC D+ TH  KGRTV +E+ERY+ VRHC YVDEV
Sbjct: 101 NVYLIVGVCGDRDTHKYKGRTVTSEEERYDGVRHCRYVDEV 141


>U29378-7|AAA68722.2|  362|Caenorhabditis elegans Hypothetical
           protein F08C6.2a protein.
          Length = 362

 Score =  131 bits (317), Expect = 6e-31
 Identities = 60/101 (59%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = +1

Query: 445 STDPMALAERDSCHYGR-IPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFP 621
           S + +A+  R++  Y + I  A A A  AGR VR+Y+DGIYD+FH GHA QL+Q K +FP
Sbjct: 49  SDEALAITTREAVDYSKKITLAMAEANEAGRPVRIYADGIYDLFHHGHANQLRQVKKMFP 108

Query: 622 NVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCXYVDEV 744
           NVYLIVGVC D+ TH  KGRTV +E+ERY+ VRHC YVDEV
Sbjct: 109 NVYLIVGVCGDRDTHKYKGRTVTSEEERYDGVRHCRYVDEV 149


>AC024751-2|AAN39663.1|  272|Caenorhabditis elegans Hypothetical
           protein Y18H1A.11 protein.
          Length = 272

 Score =  122 bits (293), Expect = 4e-28
 Identities = 57/101 (56%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = +1

Query: 445 STDPMALAERDSCHYG-RIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFP 621
           S D   + +R++  Y  +I    A++G   R VRVY+DG+YDMFH GHA Q  Q K   P
Sbjct: 15  SDDVEVIKQREAIDYSTQITLEDAISGNVTRPVRVYADGVYDMFHYGHANQFLQIKQTLP 74

Query: 622 NVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCXYVDEV 744
           NVYLIVGVCSD+ T   KGRTV  E+ERYEA+RHC YVDEV
Sbjct: 75  NVYLIVGVCSDEETMKNKGRTVQGEEERYEAIRHCRYVDEV 115


>AC006632-3|AAK85467.1|  183|Caenorhabditis elegans Hypothetical
           protein F28A10.10 protein.
          Length = 183

 Score =  115 bits (277), Expect = 4e-26
 Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
 Frame = +1

Query: 451 DPMALAERDSCHYG-RIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFPNV 627
           D   +A+R+   Y  +I    A  G + R +RVY+DGIYDMFH GHA+QL Q K +FP V
Sbjct: 12  DSTVIAKRNLIDYSEKISMENARNGLSSRPIRVYADGIYDMFHYGHAKQLLQIKQMFPMV 71

Query: 628 YLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCXYVDEVVE 750
           YLIVGVCSD+ T   KG TV +E+ERYE+VR C YVDEV++
Sbjct: 72  YLIVGVCSDENTLKFKGPTVQSENERYESVRQCRYVDEVLK 112


>AC087079-11|AAK27869.1|  370|Caenorhabditis elegans Hypothetical
           protein Y37E3.11 protein.
          Length = 370

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 36/70 (51%), Positives = 42/70 (60%)
 Frame = +1

Query: 541 RVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVR 720
           RV++DG YDM H GHA QL+QAK       LIVGV +D+     KG  V  E ERY  V 
Sbjct: 14  RVWADGCYDMVHFGHANQLRQAKQF--GQKLIVGVHNDEEIRLHKGPPVFNEQERYRMVA 71

Query: 721 HCXYVDEVVE 750
              +VDEVVE
Sbjct: 72  GIKWVDEVVE 81



 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +1

Query: 544 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKG--RTVMTEDERYEAV 717
           VY  G +D+FH GH   L++AK      YLIVG+ SDQ  +  KG    +M+  ER  +V
Sbjct: 206 VYVTGSFDLFHIGHLAFLEKAKEF--GDYLIVGILSDQTVNQYKGSNHPIMSIHERVLSV 263

Query: 718 RHCXYVDEVV 747
                V+EVV
Sbjct: 264 LAYKPVNEVV 273


>U39678-4|AAK39211.2|  330|Caenorhabditis elegans Hypothetical
           protein C39D10.3a protein.
          Length = 330

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 27/73 (36%), Positives = 38/73 (52%)
 Frame = +1

Query: 532 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 711
           +K RVY+DG +D  H  +AR L  AK       LIVG+ SD    +     + T++ERY 
Sbjct: 16  KKARVYTDGCFDFVHFANARLLWPAKQY--GKKLIVGIHSDDELDNNGILPIFTDEERYR 73

Query: 712 AVRHCXYVDEVVE 750
            +    +VDE  E
Sbjct: 74  LISAIRWVDEAFE 86



 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 544 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGR--TVMTEDERYEAV 717
           VY  G +D+FH GH   L+ AK +    YLIVG+  D   +  KG    VM   ER   +
Sbjct: 179 VYVSGAFDLFHAGHLSFLEAAKDL--GDYLIVGIVGDDDVNEEKGTIFPVMNLLERTLNI 236

Query: 718 RHCXYVDEV 744
                VDEV
Sbjct: 237 SSLKIVDEV 245


>U39678-5|ABP49528.1|  213|Caenorhabditis elegans Hypothetical
           protein C39D10.3b protein.
          Length = 213

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 544 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGR--TVMTEDERYEAV 717
           VY  G +D+FH GH   L+ AK +    YLIVG+  D   +  KG    VM   ER   +
Sbjct: 62  VYVSGAFDLFHAGHLSFLEAAKDL--GDYLIVGIVGDDDVNEEKGTIFPVMNLLERTLNI 119

Query: 718 RHCXYVDEV 744
                VDEV
Sbjct: 120 SSLKIVDEV 128


>Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical
           protein W04D2.4 protein.
          Length = 624

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -3

Query: 423 AKPIPCIRDLRIHSFCIRLMNFPASRSCVHSLAEASLLMTSCTK 292
           + P+  I  LR H   I   N  A R C     E   L+ SCTK
Sbjct: 218 SSPMEIIGFLRHHFLSISADNIYAQRVCFVDTDELKTLLVSCTK 261


>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
           protein T04A8.14 protein.
          Length = 1521

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +1

Query: 535 KVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEA 714
           K R  SD   D+    +A  L+Q   +  N  L+ G   D +    KGR    E+E+   
Sbjct: 427 KRRPISDA--DLMDTKYAETLEQLTDIHANFQLLYGALLDDMIRWEKGRLTGEEEEQEYR 484

Query: 715 VR 720
           V+
Sbjct: 485 VK 486


>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
           protein T04A8.14 protein.
          Length = 1521

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +1

Query: 535 KVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEA 714
           K R  SD   D+    +A  L+Q   +  N  L+ G   D +    KGR    E+E+   
Sbjct: 427 KRRPISDA--DLMDTKYAETLEQLTDIHANFQLLYGALLDDMIRWEKGRLTGEEEEQEYR 484

Query: 715 VR 720
           V+
Sbjct: 485 VK 486


>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
          Length = 1521

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +1

Query: 535 KVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEA 714
           K R  SD   D+    +A  L+Q   +  N  L+ G   D +    KGR    E+E+   
Sbjct: 427 KRRPISDA--DLMDTKYAETLEQLTDIHANFQLLYGALLDDMIRWEKGRLTGEEEEQEYR 484

Query: 715 VR 720
           V+
Sbjct: 485 VK 486


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,701,591
Number of Sequences: 27780
Number of extensions: 297873
Number of successful extensions: 824
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)