Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_N06
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 77 2e-14
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 72 7e-13
11_01_0767 + 6438648-6438809,6439146-6440000 71 9e-13
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 66 3e-11
11_02_0012 - 7346282-7347136,7347234-7347593 64 1e-10
11_02_0014 - 7352619-7352918,7353173-7353418 64 2e-10
11_02_0011 - 7337618-7338496,7338596-7338991 62 6e-10
11_01_0750 - 6315126-6315896,6316371-6316784 60 2e-09
04_04_0619 + 26652923-26653267,26653440-26654273 58 9e-09
01_01_1152 + 9170628-9171899 58 9e-09
11_01_0771 + 6453130-6454488 55 9e-08
05_06_0044 - 25150322-25151260 47 2e-05
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 5.0
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 6.6
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +3
Query: 486 FNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
+ ++ + + F K A + IN+W E T RIKD + D++ AT VL NA+YFKG W
Sbjct: 125 YRAEARPVSFRDKLEEARREINEWFESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDW 184
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY 812
SKFD R TSD FY+ + P M G ++Y A +++ +PY
Sbjct: 185 ESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQYIACRA-GYKVLRLPY 232
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 71.7 bits (168), Expect = 7e-13
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = +3
Query: 519 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDR 698
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDG 268
Query: 699 DFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK 815
+F++ K+++ P M +Y S N +++++PY+
Sbjct: 269 EFHLLDGKSVQAPFM-STSKKQYILSYD-NLKVLKLPYQ 305
Score = 68.1 bits (159), Expect = 9e-12
Identities = 32/90 (35%), Positives = 55/90 (61%)
Frame = +3
Query: 543 INDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 722
+N WV+ T+ IK++ P S++ T VL NA+YFKGAW+ KFD T D +F++ +
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 723 TIKVPMMYKRGDYKYGESAALNAQLIEIPY 812
+++ P M R K S+ + +++++PY
Sbjct: 529 SVQAPFMSTR--KKQYLSSYDSLKVLKLPY 556
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 71.3 bits (167), Expect = 9e-13
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +3
Query: 486 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK 815
+ FD+ T++R+F +++VP M + + + +++ +PYK
Sbjct: 102 LAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYK 152
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/94 (35%), Positives = 54/94 (57%)
Frame = +3
Query: 534 AKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVS 713
A +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D +F +
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 714 KDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK 815
K++ P M K S+ + +++++PY+
Sbjct: 66 DGKSVLAPFM--STSKKQYLSSYDSLKVLKLPYQ 97
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 64.5 bits (150), Expect = 1e-10
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +3
Query: 510 DFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERL 686
DF + ++ K IN WV + TN I++++ S+ TA VLVNAIYFKG WS+ F
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRER 175
Query: 687 TSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPY 812
T+ F+ ++ P M R D G +++++PY
Sbjct: 176 TTTGKFHRLDGSSVDAPFMSSREDQYIGFYDGF--KVLKLPY 215
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/94 (36%), Positives = 48/94 (51%)
Frame = +3
Query: 537 KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 716
K IN+WV + TN I +++ S+ T VLVNAIYFKG WS F T+ F+
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLD 147
Query: 717 DKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKG 818
++ V M R D G N ++++PY G
Sbjct: 148 GSSVNVRFMRSREDQYIGFYDGFN--VLKLPYNG 179
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 62.1 bits (144), Expect = 6e-10
Identities = 34/92 (36%), Positives = 48/92 (52%)
Frame = +3
Query: 537 KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 716
K IN WV + TN I +++ S+ TA VLVNAIYFKG WS+ F T+ F+
Sbjct: 138 KKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLD 197
Query: 717 DKTIKVPMMYKRGDYKYGESAALNAQLIEIPY 812
++ VP M R D G ++++PY
Sbjct: 198 GSSVDVPFMSSREDQYIGFHDGFT--VLKLPY 227
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Frame = +3
Query: 477 GXVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFK 653
G V+ S + DF +K A IN WV+++T + L+ ++ T VL +A+YF+
Sbjct: 123 GNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFR 182
Query: 654 GAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAAL--NAQLIEIPYK 815
G W + D R T+++ FY +++VP + +Y A+ N ++I++PYK
Sbjct: 183 GRWLDRDDLRRTTEQKFYCLDGTSVEVPFV----EYDRTRLFAVHDNFKVIKLPYK 234
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 58.0 bits (134), Expect = 9e-09
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +3
Query: 501 QNIDFSKNT-VAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFD 677
+++DF AA +N ++ + TN R+ + ++P + S+T VL NA++FK W KF+
Sbjct: 108 RSVDFQNQANAAAAEVNRFISQATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFE 167
Query: 678 ERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK 815
T R F+ + VP + + L +++++ YK
Sbjct: 168 SYDTQRRRFHRQDGTRVTVPFLSDPRTHYAARFDGLGFKVLQLFYK 213
>01_01_1152 + 9170628-9171899
Length = 423
Score = 58.0 bits (134), Expect = 9e-09
Identities = 28/95 (29%), Positives = 50/95 (52%)
Frame = +3
Query: 531 AAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYV 710
A + +N +V + T I+D++ P+S+ S+T VL NA++FKG WS F T F++
Sbjct: 159 ARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
Query: 711 SKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYK 815
++ P M ++ +A +++PYK
Sbjct: 219 LDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPYK 253
>11_01_0771 + 6453130-6454488
Length = 452
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +3
Query: 531 AAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFY 707
A K IN W T I D++ P S+ TA VL NAIYFKG W F+E T + FY
Sbjct: 173 ARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
>05_06_0044 - 25150322-25151260
Length = 312
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Frame = +3
Query: 522 NTVAAKS-INDWVEENTNNRIKDL----VNPDSLSSATAG-------VLVNAIYFKGAWS 665
N AA++ IN+W T +KD+ ++ D S G L N++YF W
Sbjct: 32 NPAAARAEINEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWD 91
Query: 666 SKFDERLTSDRDFYVSKDKTIKVPMM 743
F LT + DF+VS D ++VP M
Sbjct: 92 HPFFPHLTEEGDFHVSPDHDVRVPFM 117
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +2
Query: 341 DDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 463
++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 595 EESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 356 TEFASKSRDLRSIKGVELKMANKVYVHDG 442
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,808,498
Number of Sequences: 37544
Number of extensions: 406918
Number of successful extensions: 1024
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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