Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_N06
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 92 6e-19
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 92 6e-19
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 85 5e-17
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 85 5e-17
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 85 8e-17
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 83 2e-16
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 83 2e-16
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 83 2e-16
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 83 2e-16
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 83 2e-16
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 83 2e-16
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 83 2e-16
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 61 9e-10
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 61 9e-10
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 55 6e-08
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 48 9e-06
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 29 3.3
Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 28 7.7
U29488-12|AAA68769.3| 617|Caenorhabditis elegans Hypothetical p... 28 7.7
AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical ... 28 7.7
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 28 7.7
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 91.9 bits (218), Expect = 6e-19
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N+ ++F +A++IN++V ENT IK ++NPDS+S VL NA YFK W
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + T R+F+ S++ + ++ R + KY E+ Q++ +PYK +L +
Sbjct: 178 QTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLSLPYKDTSFALSI 235
Query: 840 VFXKTRMAL 866
KTR L
Sbjct: 236 FLPKTRFGL 244
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 91.9 bits (218), Expect = 6e-19
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N+ ++F +A++IN++V ENT IK ++NPDS+S VL NA YFK W
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + T R+F+ S++ + ++ R + KY E+ Q++ +PYK +L +
Sbjct: 178 QTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLSLPYKDTSFALSI 235
Query: 840 VFXKTRMAL 866
KTR L
Sbjct: 236 FLPKTRFGL 244
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 85.4 bits (202), Expect = 5e-17
Identities = 45/124 (36%), Positives = 74/124 (59%)
Frame = +3
Query: 486 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWS 665
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A +L+NAI+F+G W
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVDA-ILINAIFFQGDWR 174
Query: 666 SKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVF 845
KF E ++ +F +S + VPM+ + DY Y + Q+I IP+K D+S+ +F
Sbjct: 175 RKFGE--PAESNFSISATENRLVPMLRETRDYFYNKDD--EWQVIGIPFK-DKSAWFAIF 229
Query: 846 XKTR 857
TR
Sbjct: 230 LPTR 233
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 85.4 bits (202), Expect = 5e-17
Identities = 45/124 (36%), Positives = 74/124 (59%)
Frame = +3
Query: 486 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWS 665
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A +L+NAI+F+G W
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVDA-ILINAIFFQGDWR 174
Query: 666 SKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVF 845
KF E ++ +F +S + VPM+ + DY Y + Q+I IP+K D+S+ +F
Sbjct: 175 RKFGE--PAESNFSISATENRLVPMLRETRDYFYNKDD--EWQVIGIPFK-DKSAWFAIF 229
Query: 846 XKTR 857
TR
Sbjct: 230 LPTR 233
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 84.6 bits (200), Expect = 8e-17
Identities = 43/129 (33%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNAFA-FLVNAMYFKADW 163
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK-YGESAALNAQLIEIPYKGDQSSLIV 839
SKF + T+ R+F+ S+ ++ ++P + + +++ Y E Q++ + Y + +L +
Sbjct: 164 QSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTEDVLF--QVLSLKYADPKFTLAI 221
Query: 840 VFXKTRMAL 866
K R L
Sbjct: 222 FLPKQRFGL 230
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N+ ++DF A++IN++V ENT + IK ++ DS++S VL NA+YFK W
Sbjct: 109 LYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADW 168
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + T +F+ S D ++ ++ Y E+ Q++ +PYK + +L +
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226
Query: 840 VFXKTRMAL 866
KTR L
Sbjct: 227 FLPKTRFGL 235
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N+ ++DF A++IN++V ENT + IK ++ DS++S VL NA+YFK W
Sbjct: 109 LYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADW 168
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + T +F+ S D ++ ++ Y E+ Q++ +PYK + +L +
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226
Query: 840 VFXKTRMAL 866
KTR L
Sbjct: 227 FLPKTRFGL 235
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N+ ++DF A++IN++V ENT + IK ++ DS++S VL NA+YFK W
Sbjct: 109 LYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADW 168
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + T +F+ S D ++ ++ Y E+ Q++ +PYK + +L +
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226
Query: 840 VFXKTRMAL 866
KTR L
Sbjct: 227 FLPKTRFGL 235
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N+ ++DF A++IN++V ENT + IK ++ DS++S VL NA+YFK W
Sbjct: 109 LYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADW 168
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + T +F+ S D ++ ++ Y E+ Q++ +PYK + +L +
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226
Query: 840 VFXKTRMAL 866
KTR L
Sbjct: 227 FLPKTRFGL 235
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N+ ++DF A++IN++V ENT + IK ++ DS++S VL NA+YFK W
Sbjct: 109 LYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADW 168
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + T +F+ S D ++ ++ Y E+ Q++ +PYK + +L +
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226
Query: 840 VFXKTRMAL 866
KTR L
Sbjct: 227 FLPKTRFGL 235
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N+ ++DF A++IN++V ENT + IK ++ DS++S VL NA+YFK W
Sbjct: 109 LYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADW 168
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + T +F+ S D ++ ++ Y E+ Q++ +PYK + +L +
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226
Query: 840 VFXKTRMAL 866
KTR L
Sbjct: 227 FLPKTRFGL 235
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/129 (33%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YFK W
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNAFA-FLVNAMYFKADW 163
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK-YGESAALNAQLIEIPYKGDQSSLIV 839
SKF + T+ R+F+ S+ ++ ++P + +++ Y E Q++ + Y + +L +
Sbjct: 164 QSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDYTEDVLF--QVLSLKYADPKFTLAI 221
Query: 840 VFXKTRMAL 866
K R L
Sbjct: 222 FLPKQRFGL 230
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 61.3 bits (142), Expect = 9e-10
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 486 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWS 665
+ +D +++D + A + IN +V TN +IK++ DS+ A A +L+N+IYFK W
Sbjct: 109 YGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWD 166
Query: 666 SKFDERLTSDRDFYVSKDKTIKVPMMYK-RGDYKYGESAALNAQLIEIPYKGDQSSLIVV 842
KFD S++DF + + K+ M + D + + ++ + Y + V
Sbjct: 167 DKFDGMSVSEQDFTLHTGEKKKIKFMKEFMNDRSFSSDDVFD--VLHVAYSDQRYQFSVF 224
Query: 843 FXKTRMAL 866
K R +L
Sbjct: 225 LPKLRNSL 232
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 323 LSASLXDDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENF 463
L + D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F
Sbjct: 54 LLSGATDEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTF 101
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 61.3 bits (142), Expect = 9e-10
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 486 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWS 665
+ +D +++D + A + IN +V TN +IK++ DS+ A A +L+N+IYFK W
Sbjct: 109 YGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA-LLINSIYFKADWD 166
Query: 666 SKFDERLTSDRDFYVSKDKTIKVPMMYK-RGDYKYGESAALNAQLIEIPYKGDQSSLIVV 842
KFD S++DF + + K+ M + D + + ++ + Y + V
Sbjct: 167 DKFDGMSVSEQDFTLHTGEKKKIKFMKEFMNDRSFSSDDVFD--VLHVAYSDQRYQFSVF 224
Query: 843 FXKTRMAL 866
K R +L
Sbjct: 225 LPKLRNSL 232
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 323 LSASLXDDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENF 463
L + D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F
Sbjct: 54 LLSGATDEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTF 101
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N +V + D K+IN + ENT+ IK + S+ V ++A F+ W
Sbjct: 110 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 169
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIEIPYKGDQSSLIV 839
+KF + TS ++F+ + + + ++ G + KY E+ Q++ +PY + +
Sbjct: 170 QNKFHKLSTSKKEFFCTANSHRNIKFLHATGANRKYCENDKF--QVLSLPYTDSSFEMTI 227
Query: 840 VFXKTRMAL 866
K + L
Sbjct: 228 FLPKEQFGL 236
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 48.0 bits (109), Expect = 9e-06
Identities = 22/91 (24%), Positives = 44/91 (48%)
Frame = +3
Query: 483 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 662
++N +V + D K+IN + ENT+ IK + S+ V ++A F+ W
Sbjct: 109 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 168
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 755
+KF + TS ++F+ + + + ++ G
Sbjct: 169 QNKFHKLSTSKKEFFCTANSHRNIKFLHATG 199
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 779
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 686
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 663 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 779
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 178
>Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical
protein F36F2.2 protein.
Length = 290
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 316 KALHGFHHQKLKLTEREEAAPKMPRGQRFSL 224
K L H ++ T EE+ P P+GQRF L
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRFDL 193
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 118 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSVVLSAFSVLPPLAQLALAS 291
+A+ ++ + N+L+N G D+ R V+ +NN KS+ + F +P L L L+
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183
Query: 292 DGET 303
+ T
Sbjct: 184 NNMT 187
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 162 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 64
H ++ G H DG K+ N C GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179
>U29488-12|AAA68769.3| 617|Caenorhabditis elegans Hypothetical
protein C56C10.1 protein.
Length = 617
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 761 IIAAFIHHGYFDCFVFAHVEVTVTGQSLVKFRTPCSLEIDGVDENT 624
++ H YFD FVF V + ++ + SL++DGV ++T
Sbjct: 387 LLGTVTHEEYFD-FVFERVPMRSCRDVVLSMMSLASLKLDGVPDDT 431
>AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical
protein Y47D3A.1 protein.
Length = 454
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 417 RTKYTFMMVE---N*TRILQSFPGXVFNSDVQNID--FSKNTVAAKSINDWVEENTNNRI 581
R+ YT +VE TRI++ G +FN+ V N+ F N + K +
Sbjct: 301 RSMYTLDVVEINIKLTRIMEKCHGSLFNNFVPNVRTIFPSNKITLKL--------SKEVC 352
Query: 582 KDLVNPDSLSSATAGVLVNA 641
K L+NPD++ +GV++ A
Sbjct: 353 KVLMNPDNVEDFISGVILMA 372
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 770 SIFIIAAFIHHGYFDCFVFAHVEVTVTGQSL 678
SI +AFI H +F+CF F E V+ S+
Sbjct: 172 SIIFTSAFILHVFFECFAFGIQEDAVSVTSI 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,960,882
Number of Sequences: 27780
Number of extensions: 357988
Number of successful extensions: 1065
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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