Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_N04
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    38   0.007
U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical pr...    33   0.20 
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U07628-1|AAA17738.1|  515|Caenorhabditis elegans APX-1 protein.        28   7.5  
AF101319-2|AAC69353.4|  515|Caenorhabditis elegans Anterior phar...    28   7.5  
AF040656-3|AAB95049.1|  385|Caenorhabditis elegans Innexin prote...    28   7.5  
Z81547-3|CAB04461.1|  253|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z70212-9|CAA94168.1|  491|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z50742-6|CAA90619.1|  491|Caenorhabditis elegans Hypothetical pr...    28   10.0 
AF067219-6|AAC17030.1|  382|Caenorhabditis elegans Innexin prote...    28   10.0 
AF016450-10|AAB65990.1|  166|Caenorhabditis elegans Hypothetical...    28   10.0 

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +3

Query: 162 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGK 332
           P RK   +G+  +  C    EP C  ENPE  D V     C    C C +  VR++ TGK
Sbjct: 71  PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124

Query: 333 CVPESEC 353
           CV +++C
Sbjct: 125 CVEKNKC 131


>U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical
           protein C53B7.2 protein.
          Length = 195

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 204 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 353
           C QM  P CE+P     VD    C  P C C  P    + + +C+P + C
Sbjct: 38  CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
 Frame = +3

Query: 108 LYLLFVVAAVGYVTGQHFPTR-KCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 284
           L   FV+A+V  +  +       C  GE     C  M  P+    ++   +    P   P
Sbjct: 7   LVAFFVIASVQAIPQRTKRQNCDCTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPP 63

Query: 285 QCFCDRPNVRNTKTGKCVPESEC**NCVN 371
           +C C   NVRN  TG  +P      NCV+
Sbjct: 64  KCVCTEGNVRNIITGPSLPALFKPYNCVS 92


>U07628-1|AAA17738.1|  515|Caenorhabditis elegans APX-1 protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +3

Query: 189 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 359
           H V  C    +  DC NP       + G C  P QC C       T+  +C+P + C   
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216

Query: 360 NCVN 371
           +CVN
Sbjct: 217 DCVN 220


>AF101319-2|AAC69353.4|  515|Caenorhabditis elegans Anterior pharynx
           in excess protein1 protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +3

Query: 189 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 359
           H V  C    +  DC NP       + G C  P QC C       T+  +C+P + C   
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216

Query: 360 NCVN 371
           +CVN
Sbjct: 217 DCVN 220


>AF040656-3|AAB95049.1|  385|Caenorhabditis elegans Innexin protein
           13 protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 69  CIVKENVXNEKFYLYLLFVVAAVGYVT 149
           C++  N+ NEK Y++L F +  VG  T
Sbjct: 259 CVLMINMFNEKVYVFLWFWLVIVGVAT 285


>Z81547-3|CAB04461.1|  253|Caenorhabditis elegans Hypothetical
           protein F53F8.4 protein.
          Length = 253

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +2

Query: 752 PRSLTRCARSFGCGER--YQLTQRR*YGYPPEXGGXR 856
           PR    CA S+GCG    Y+L  R    Y P+ G  R
Sbjct: 42  PRPSCGCASSYGCGSYGCYRLRARGAKSYQPKRGRSR 78


>Z70212-9|CAA94168.1|  491|Caenorhabditis elegans Hypothetical
           protein R04D3.1 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 108 LYLLFVVAAVGYVTGQHFPTRKCPKG 185
           L L F VA VGY+   +   RK PKG
Sbjct: 5   LILAFFVATVGYLVHFYLKVRKYPKG 30


>Z50742-6|CAA90619.1|  491|Caenorhabditis elegans Hypothetical
           protein R04D3.1 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 108 LYLLFVVAAVGYVTGQHFPTRKCPKG 185
           L L F VA VGY+   +   RK PKG
Sbjct: 5   LILAFFVATVGYLVHFYLKVRKYPKG 30


>AF067219-6|AAC17030.1|  382|Caenorhabditis elegans Innexin protein
           15 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 30  IREPLKVXXFISSCIVKENVXNEKFYLYLLFVVAAVGYVT 149
           IR+   +  +   C++  N+ NEK +L L + + A+ ++T
Sbjct: 245 IRKKGSIQKYSVQCVLSMNMLNEKVFLALFYWIIALFFLT 284


>AF016450-10|AAB65990.1|  166|Caenorhabditis elegans Hypothetical
           protein B0238.12 protein.
          Length = 166

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 20/68 (29%), Positives = 24/68 (35%)
 Frame = +3

Query: 150 GQHFPTRKCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTG 329
           GQ  P   C         C    EP C NP           C    C C    VRN  T 
Sbjct: 32  GQRLP---CRGRNEEYKTCGTACEPSCTNPNPMC----TKQCINNVCQCRSGYVRNEITR 84

Query: 330 KCVPESEC 353
           +CV +++C
Sbjct: 85  QCVRQAQC 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,440,177
Number of Sequences: 27780
Number of extensions: 323858
Number of successful extensions: 849
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)