Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_N01
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952...    31   1.6  
09_02_0384 - 8294914-8297817                                           28   8.7  
05_05_0042 - 21798255-21798871,21799400-21799777,21799861-218008...    28   8.7  
04_01_0377 - 4970034-4970687                                           28   8.7  

>01_06_0919 -
           32993752-32993856,32994383-32994592,32994666-32995220,
           32995705-32995926,32996381-32996511,32997456-32998353,
           32998453-32998530,32998612-32998683,32998728-32998763,
           32999413-33000353,33000531-33000659,33000751-33000894,
           33000994-33001060,33002434-33002502,33003144-33003278
          Length = 1263

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 457 EVFGSSDKWNGLGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSG-CLRDF 633
           E+F + + W+           D  H+   +M  +N+G + FDH  D + +LLS   L + 
Sbjct: 91  EIFENKENWSNYS------HTDPSHSQMDVMVELNNGGESFDHSEDTSYRLLSNDFLENS 144

Query: 634 RN 639
           RN
Sbjct: 145 RN 146


>09_02_0384 - 8294914-8297817
          Length = 967

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 192 CIQNVCAPIACLH*QMGTNKNAHTINLKFKNSIATLPCETRSS 64
           C+    + IACL    G  KN   +NL + N +  +P    SS
Sbjct: 588 CLNLADSHIACLPENFGDLKNLRFLNLSYTNHLRNIPSGVISS 630


>05_05_0042 - 21798255-21798871,21799400-21799777,21799861-21800820,
            21800918-21800957,21801471-21801766,21802696-21802774,
            21803013-21803100,21803189-21803273,21803364-21803625,
            21803720-21805027,21806187-21806393,21807288-21807519,
            21808267-21808353,21808427-21808735,21808879-21808957,
            21809788-21809867,21809952-21810029,21810744-21810831,
            21811102-21811241,21811342-21811415,21812043-21812125,
            21812403-21812516,21813975-21814136,21814377-21814641
          Length = 2036

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +3

Query: 192  KYSFKPPYLXQKDGSVPFWEYGGNAIASGXERASRAVXSKPEGGYMDQTA 341
            KY+F+P ++  + GSV +   G  +  SG + +   + S   GG  D  A
Sbjct: 1553 KYAFEPLFILAEPGSVDY-SSGMESSKSGVDASGSGIYSSISGGGSDSGA 1601


>04_01_0377 - 4970034-4970687
          Length = 217

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = -2

Query: 745 GSTAXSPARCSSFRCGSRQLTCSCSILSWPGSGTACS*SRADIRTGAEWCRHSCDRRP*C 566
           G+   S A CSS RCGS+    +CS      +   CS        G+E+C   C   P C
Sbjct: 50  GTGCQSGACCSSQRCGSQGGGATCS------NNQCCS-QYGYCGFGSEYCGSGCQNGP-C 101

Query: 565 R 563
           R
Sbjct: 102 R 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,109,916
Number of Sequences: 37544
Number of extensions: 475290
Number of successful extensions: 1096
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)