Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_N01
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical p... 186 1e-47
DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like... 186 1e-47
U41274-2|AAD50512.1| 347|Caenorhabditis elegans Intracellular l... 117 1e-26
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 29 4.5
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 29 4.5
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 29 4.5
>Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical
protein K07A1.8 protein.
Length = 492
Score = 186 bits (454), Expect = 1e-47
Identities = 85/166 (51%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Frame = +1
Query: 277 GESVRLAPSXRSQKGAIWTKQP-INFDWWEVDIMFKITGRGRIGADGLAFWYTTXRGDYT 453
GE +RLAPS RS+KG W K+ + + ++VDI KI G+GR+GADGL WYT+ G
Sbjct: 59 GEQLRLAPSMRSRKGIAWNKRAFLESENFQVDIALKIGGQGRVGADGLGIWYTSQLGAL- 117
Query: 454 GEVFGSSDKWNGLGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDF 633
G VFG +D W G+G+ DSFDND + NNP + ++NDGT+ +DH +DG+ Q+LS C RDF
Sbjct: 118 GPVFGGNDFWTGMGLFLDSFDNDGQKNNPQVSLMLNDGTRSYDHHTDGSQQILSSCQRDF 177
Query: 634 RNKPFPTRAKIEYYMNTLTVYFHNGMTNNEQDYXLCFRXXNVVLPR 771
RNKP+P R +IEY N LTV+ +GM + Y LC R N+ LPR
Sbjct: 178 RNKPYPVRIRIEYLKNVLTVHIDDGMQPTPR-YELCMRAENIFLPR 222
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +3
Query: 138 LCPFVSVNTQS--VHRRFEYKYSFKPPYLXQKDGSVPFWEYGGNAIASGXE 284
L V++ Q+ V ++FEYK+SF+ P L Q+DGS+PFW G+AIASG +
Sbjct: 11 LAVIVTIQAQNTPVFKKFEYKHSFRAPNLAQRDGSIPFWIVSGDAIASGEQ 61
>DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like
protein protein.
Length = 492
Score = 186 bits (454), Expect = 1e-47
Identities = 85/166 (51%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Frame = +1
Query: 277 GESVRLAPSXRSQKGAIWTKQP-INFDWWEVDIMFKITGRGRIGADGLAFWYTTXRGDYT 453
GE +RLAPS RS+KG W K+ + + ++VDI KI G+GR+GADGL WYT+ G
Sbjct: 59 GEQLRLAPSMRSRKGIAWNKRAFLESENFQVDIALKIGGQGRVGADGLGIWYTSQLGAL- 117
Query: 454 GEVFGSSDKWNGLGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDF 633
G VFG +D W G+G+ DSFDND + NNP + ++NDGT+ +DH +DG+ Q+LS C RDF
Sbjct: 118 GPVFGGNDFWTGMGLFLDSFDNDGQKNNPQVSLMLNDGTRSYDHHTDGSQQILSSCQRDF 177
Query: 634 RNKPFPTRAKIEYYMNTLTVYFHNGMTNNEQDYXLCFRXXNVVLPR 771
RNKP+P R +IEY N LTV+ +GM + Y LC R N+ LPR
Sbjct: 178 RNKPYPVRIRIEYLKNVLTVHIDDGMQPTPR-YELCMRAENIFLPR 222
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +3
Query: 138 LCPFVSVNTQS--VHRRFEYKYSFKPPYLXQKDGSVPFWEYGGNAIASGXE 284
L V++ Q+ V ++FEYK+SF+ P L Q+DGS+PFW G+AIASG +
Sbjct: 11 LAVIVTIQAQNTPVFKKFEYKHSFRAPNLAQRDGSIPFWIVSGDAIASGEQ 61
>U41274-2|AAD50512.1| 347|Caenorhabditis elegans Intracellular
lectin protein 2 protein.
Length = 347
Score = 117 bits (281), Expect = 1e-26
Identities = 65/169 (38%), Positives = 95/169 (56%), Gaps = 8/169 (4%)
Frame = +1
Query: 286 VRLAPSXRSQKGAIWTKQPINFDWWEVDIMFKITG-RGRIGADGLAFWYTTXRGDYTGEV 462
+RL +S+ GA+W QP+ WE+ + FK+TG G + DG+A WYT+ + G V
Sbjct: 78 IRLTADEQSKAGALWNTQPVWSRDWELQVSFKVTGSTGDLFGDGMAIWYTS-EPNILGPV 136
Query: 463 FGSSDKWNGLGVIFDSFDNDN---KHNNPYIMAVVNDGTKVFDHKSDGT-TQL---LSGC 621
FG D + GL V D++ N N +H +P+I A+V+DG+ +DH DGT TQL +GC
Sbjct: 137 FGGKDYFRGLAVFLDTYSNHNGPHQHGHPFISAMVSDGSLHYDHDKDGTHTQLGGENTGC 196
Query: 622 LRDFRNKPFPTRAKIEYYMNTLTVYFHNGMTNNEQDYXLCFRXXNVVLP 768
FRNK T+ I Y +TL+++ N+ + LC NV LP
Sbjct: 197 TAKFRNKDHDTQVLIRYVGDTLSIF---SDIENKGIWNLCMSVNNVQLP 242
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 514 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 636
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 514 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 636
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 514 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 636
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,149,355
Number of Sequences: 27780
Number of extensions: 389274
Number of successful extensions: 901
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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