Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_M22
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0826 - 32252546-32253208                                         32   0.69 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    30   2.8  
01_01_0096 + 737928-739894,740164-740221                               29   6.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     28   8.5  

>01_06_0826 - 32252546-32253208
          Length = 220

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = +2

Query: 656 EVAKPDRTIKIPGVSPWKLPRALSCSRPCRLXDTCPPFLPFGXAWRXSHSSXCRYLXSGV 835
           EV+KP R +   G     LP  L+C + C+     PP  P G   R   SS      +  
Sbjct: 5   EVSKPSRRLSPKGSFKLSLPSLLACGQ-CKATAVSPPESPTGVGARSFSSSASSSAGTSR 63

Query: 836 GR 841
           GR
Sbjct: 64  GR 65


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +1

Query: 592 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF-PTL-PLTGYLSA 765
           CWR  +        T  D Q    +    +KD    P + PSC L+F P L PL   L A
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLYA 342

Query: 766 F 768
           F
Sbjct: 343 F 343


>01_01_0096 + 737928-739894,740164-740221
          Length = 674

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = +3

Query: 648 SSQRWRNPTGL*RYQAF--PPGSSLVRSPVPDPAAYXIPVRLFSXSGKRGAFLIAHXV 815
           SS  +  P+G   YQ    PP      SPVP PA   I       S KRG  L+A  V
Sbjct: 229 SSTTFTCPSGT-NYQIIFCPPTDLTSSSPVPPPAPIAIGPSGLDSSSKRGGRLVATIV 285


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 373 NESAN---ARGEAVCVLGALPLPRSLTRCAR 456
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 424 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--EXTCEQKASKRPGTV 579
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,555,484
Number of Sequences: 37544
Number of extensions: 406789
Number of successful extensions: 1033
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)