Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_M21
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1778 + 29451902-29452166,29452665-29452849,29453504-294536...    35   0.099
03_02_0275 + 7042433-7042732,7042864-7043140,7043751-7044231,704...    32   0.70 
03_05_0861 - 28348669-28348711,28349471-28349557,28349640-283497...    31   1.2  
08_01_0577 + 5132876-5132894,5134352-5134845,5134937-5135162,513...    29   3.7  
03_05_0441 + 24350026-24350081,24350186-24351011,24351088-243511...    29   6.5  
04_01_0505 + 6599181-6599249,6599537-6599632,6599931-6599962,660...    28   8.6  

>07_03_1778 +
           29451902-29452166,29452665-29452849,29453504-29453693,
           29453990-29454168,29454263-29454314,29454426-29454553,
           29454920-29455099,29455209-29455276,29455364-29455506,
           29455682-29455743,29455874-29455987,29456180-29456320,
           29456680-29456832,29456973-29457026,29457102-29457212,
           29457339-29457512,29457600-29457680,29457788-29457886,
           29457905-29458057
          Length = 843

 Score = 34.7 bits (76), Expect = 0.099
 Identities = 24/82 (29%), Positives = 37/82 (45%)
 Frame = +3

Query: 177 IMVHLTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHND 356
           + +HLT+E     EE         LS  DLC I    N+++      +++S W+G ++  
Sbjct: 715 LQIHLTKEP--LVEEYSIAASLWKLSSCDLCEIA--RNSVYQSGFSHRLKSHWIGRNYYK 770

Query: 357 RKHDKNFTVKGIHNLQXPPRRV 422
           R HD N     IH    P  R+
Sbjct: 771 RGHDGN----DIHQTNVPHIRI 788


>03_02_0275 +
           7042433-7042732,7042864-7043140,7043751-7044231,
           7044943-7045491,7045556-7045680,7045824-7045966
          Length = 624

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +1

Query: 439 NDNLLDALEDVMNTKNIIFHHTKAHYKPPEKGAAYPMHQDYHYFPYEKDSM 591
           +D ++D ++ V+N  N++    K  Y+  E    YP+   ++  PY+   +
Sbjct: 512 DDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGL 562


>03_05_0861 -
           28348669-28348711,28349471-28349557,28349640-28349784,
           28350832-28350900,28351147-28351207,28351375-28351493,
           28351659-28351713
          Length = 192

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +3

Query: 189 LTEEQKKFYEENGYIVLKNVLSEEDL 266
           LT+EQ +F++ NGY+VL +  S E++
Sbjct: 7   LTDEQLRFFDANGYLVLGSFSSAEEV 32


>08_01_0577 +
           5132876-5132894,5134352-5134845,5134937-5135162,
           5135695-5135917,5136315-5136528,5136769-5136806,
           5136977-5137142
          Length = 459

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 461 RASRRLSLKINLENTAWWXLKVV-DTFHSKILVMFPVVMITA 339
           R+     LKI++    WW L V+ + ++ K+L  FP   +T+
Sbjct: 95  RSEAAQKLKISIYFATWWALNVIFNIYNKKVLNAFPYPWLTS 136


>03_05_0441 +
           24350026-24350081,24350186-24351011,24351088-24351189,
           24351278-24351343,24351418-24351483,24351594-24351800,
           24351925-24352086
          Length = 494

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
 Frame = +1

Query: 439 NDNLLDAL----EDVMNTKNIIFHHTKAHYKPPEKGAAYPMHQDYH--YFPY 576
           +DNL++ L      VM ++N   HH K   +PPEK AA  + +D    +FP+
Sbjct: 21  DDNLIELLWCNGHVVMQSQN---HHRKLPPRPPEKAAAAAVQEDEAGLWFPF 69


>04_01_0505 +
           6599181-6599249,6599537-6599632,6599931-6599962,
           6601191-6601428,6601852-6601905,6601923-6602130,
           6602353-6602590,6602788-6602962,6603074-6603442
          Length = 492

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/89 (19%), Positives = 40/89 (44%)
 Frame = +1

Query: 418 VFSKFIFNDNLLDALEDVMNTKNIIFHHTKAHYKPPEKGAAYPMHQDYHYFPYEKDSMVA 597
           ++ + +F +  ++  + ++    +IF H+K+  K  E        +    +   K   +A
Sbjct: 24  IYPEELFRNITINLFKTILPYVQLIFTHSKSQEKDNEDNDTTRNFKSIRLWKCNKYQSLA 83

Query: 598 SFLHLDAADPKNGCLYVYPGSHKLGPQED 684
           S  ++    P + C+Y++  S   G +ED
Sbjct: 84  SASYV----PSHSCVYIFFLSDNTGNEED 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,521,597
Number of Sequences: 37544
Number of extensions: 421737
Number of successful extensions: 987
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)