BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_M19
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 4.2
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 4.2
L06155-1|AAC13541.1| 360|Homo sapiens melanocortin receptor pro... 31 4.2
BC098351-1|AAH98351.1| 360|Homo sapiens melanocortin 3 receptor... 31 4.2
BC098169-1|AAH98169.1| 360|Homo sapiens melanocortin 3 receptor... 31 4.2
BC096737-1|AAH96737.1| 360|Homo sapiens melanocortin 3 receptor... 31 4.2
BC096702-1|AAH96702.1| 360|Homo sapiens melanocortin 3 receptor... 31 4.2
BC069599-1|AAH69599.1| 360|Homo sapiens melanocortin 3 receptor... 31 4.2
BC069105-1|AAH69105.1| 360|Homo sapiens melanocortin 3 receptor... 31 4.2
AY227893-1|AAO72726.1| 360|Homo sapiens melanocortin 3 receptor... 31 4.2
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 31 4.2
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 31 7.4
BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein pr... 31 7.4
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 31 7.4
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein. 31 7.4
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 493 SVTPKTKPARK---SPXSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLXMTVSSTVIAP 663
S TP T P K SP + P T+ + S PRT +T +T T +S P
Sbjct: 2887 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIP 2944
Query: 664 LTPSNTTGTL 693
+ TTGTL
Sbjct: 2945 SSTLGTTGTL 2954
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 493 SVTPKTKPARK---SPXSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLXMTVSSTVIAP 663
S TP T P K SP + P T+ + S PRT +T +T T +S P
Sbjct: 101 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTTTATKSTATSVTPIP 158
Query: 664 LTPSNTTGTL 693
+ TTGTL
Sbjct: 159 SSTLGTTGTL 168
>L06155-1|AAC13541.1| 360|Homo sapiens melanocortin receptor
protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 ETDFVLP-SSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 240
E DFV P SSS +R LL P L L+T +SC L + +P PN
Sbjct: 9 EGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASC----CLPSVQPTLPN 53
>BC098351-1|AAH98351.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 ETDFVLP-SSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 240
E DFV P SSS +R LL P L L+T +SC L + +P PN
Sbjct: 9 EGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASC----CLPSVQPTLPN 53
>BC098169-1|AAH98169.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 ETDFVLP-SSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 240
E DFV P SSS +R LL P L L+T +SC L + +P PN
Sbjct: 9 EGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASC----CLPSVQPTLPN 53
>BC096737-1|AAH96737.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 ETDFVLP-SSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 240
E DFV P SSS +R LL P L L+T +SC L + +P PN
Sbjct: 9 EGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASC----CLPSVQPTLPN 53
>BC096702-1|AAH96702.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 ETDFVLP-SSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 240
E DFV P SSS +R LL P L L+T +SC L + +P PN
Sbjct: 9 EGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASC----CLPSVQPTLPN 53
>BC069599-1|AAH69599.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 ETDFVLP-SSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 240
E DFV P SSS +R LL P L L+T +SC L + +P PN
Sbjct: 9 EGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASC----CLPSVQPTLPN 53
>BC069105-1|AAH69105.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 ETDFVLP-SSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 240
E DFV P SSS +R LL P L L+T +SC L + +P PN
Sbjct: 9 EGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASC----CLPSVQPTLPN 53
>AY227893-1|AAO72726.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 ETDFVLP-SSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 240
E DFV P SSS +R LL P L L+T +SC L + +P PN
Sbjct: 9 EGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASC----CLPSVQPTLPN 53
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 493 SVTPKTKPARK---SPXSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLXMTVSSTVIAP 663
S TP T P K SP + P T+ + S PRT +T +T T +S P
Sbjct: 361 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIP 418
Query: 664 LTPSNTTGTL 693
+ TTGTL
Sbjct: 419 SSTLGTTGTL 428
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 499 TPKTKPARK---SPXSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLXMTVSSTVIAPLT 669
TP T P K SP + P T+ + S PRT +T +T T +S P +
Sbjct: 54 TPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSS 111
Query: 670 PSNTTGTL 693
TTGTL
Sbjct: 112 TLGTTGTL 119
>BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 30.7 bits (66), Expect = 7.4
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 251 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 430
SE + G QGSR SD+ + L +P N Q + H V SD+ +DCQ
Sbjct: 45 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 101
Query: 431 KQKGPS-RPQVDRPTKPQQN 487
K G S +PQ + + +N
Sbjct: 102 KPSGASQQPQSNFEVQSSRN 121
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 30.7 bits (66), Expect = 7.4
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +1
Query: 499 TPKTKPARKSPXSLPPCWKTTEFTSRSCPPRTNST*SSITR---KVLXMTVSSTVIAPLT 669
+PK P R SP PP T R+ P RT T +S TR + T T
Sbjct: 170 SPKRTPPRASPRRTPPRASPTRAPPRASPKRTPPT-ASPTRTPPRASPTRTPPTESPART 228
Query: 670 PSNTTGTLSPP 702
P + T +PP
Sbjct: 229 PPRASPTRTPP 239
>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
Length = 1685
Score = 30.7 bits (66), Expect = 7.4
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 251 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 430
SE + G QGSR SD+ + L +P N Q + H V SD+ +DCQ
Sbjct: 1121 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 1177
Query: 431 KQKGPS-RPQVDRPTKPQQN 487
K G S +PQ + + +N
Sbjct: 1178 KPSGASQQPQSNFEVQSSRN 1197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,230,134
Number of Sequences: 237096
Number of extensions: 2263499
Number of successful extensions: 5517
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5513
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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