Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_M16
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts prot... 81 4e-15
AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts pr... 80 9e-15
BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein. 78 4e-14
BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongati... 78 4e-14
Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein. 31 4.2
BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein. 31 4.2
BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein. 31 4.2
AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein. 31 4.2
AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein. 31 4.2
AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein. 31 4.2
AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein. 31 4.2
AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein. 31 4.2
AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein pro... 31 4.2
>L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts
protein.
Length = 294
Score = 81.4 bits (192), Expect = 4e-15
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Frame = +2
Query: 251 RIHTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWA 424
R++ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+
Sbjct: 2 RVYAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWS 61
Query: 425 KATKLAGRTALQGV 466
KA KL GR +G+
Sbjct: 62 KAAKLQGRKTKEGL 75
Score = 80.2 bits (189), Expect = 9e-15
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Frame = +3
Query: 396 MNKPKQWDGQRQLN*LAGRPSR-GLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDA 572
++K Q +G + L GR ++ GL+ + + N LVE+NCETDFV++N KFQ +++
Sbjct: 51 LHKEAQKEGWSKAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQV 110
Query: 573 AIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRR 746
A+ + T +K L+S +L L A ++ L + LAL IG +GEN +L+R
Sbjct: 111 ALGTMMHCQTLKDQPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKR 170
Query: 747 AECWKANSEDVXIAGYTHPA--PXXXXXXXXGKYGALL 854
A W + Y H A GKYGAL+
Sbjct: 171 A-AWVKVPSGFYVGSYVHGAMQSPSLHKLVLGKYGALV 207
>AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts
protein.
Length = 325
Score = 80.2 bits (189), Expect = 9e-15
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Frame = +3
Query: 396 MNKPKQWDGQRQLN*LAGRPSR-GLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDA 572
++K Q +G + L GR ++ GL+ + + N LVE+NCETDFV++N KFQ +++
Sbjct: 82 LHKEAQKEGWSKAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQV 141
Query: 573 AIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRR 746
A+ + T +K L+S +L L A ++ L + LAL IG +GEN +L+R
Sbjct: 142 ALGTMMHCQTLKDQPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKR 201
Query: 747 AECWKANSEDVXIAGYTHPA--PXXXXXXXXGKYGALL 854
A W + Y H A GKYGAL+
Sbjct: 202 A-AWVKVPSGFYVGSYVHGAMQSPSLHKLVLGKYGALV 238
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 430
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 431 TKLAGRTALQGV 466
KL GR +G+
Sbjct: 95 AKLQGRKTKEGL 106
>BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein.
Length = 325
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 430
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 431 TKLAGRTALQGV 466
KL GR +G+
Sbjct: 95 AKLQGRKTKEGL 106
Score = 77.8 bits (183), Expect = 5e-14
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Frame = +3
Query: 396 MNKPKQWDGQRQLN*LAGRPSR-GLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDA 572
++K Q +G + L GR ++ GL+ + + N LVE+NCETDFV++N KFQ +++
Sbjct: 82 LHKEAQKEGWSKAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQV 141
Query: 573 AIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGENAVLRR 746
A+ + T +K L+S +L L A ++ L + LAL IG +GE +L+R
Sbjct: 142 ALGTMMHCQTLKDQPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGETMILKR 201
Query: 747 AECWKANSEDVXIAGYTHPA--PXXXXXXXXGKYGALL 854
A W + Y H A GKYGAL+
Sbjct: 202 A-AWVKVPSGFYVGSYVHGAMQSPSLHKLVLGKYGALV 238
>BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongation
factor, mitochondrial protein.
Length = 346
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 430
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 431 TKLAGRTALQGV 466
KL GR +G+
Sbjct: 95 AKLQGRKTKEGL 106
Score = 64.9 bits (151), Expect = 4e-10
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 26/179 (14%)
Frame = +3
Query: 396 MNKPKQWDGQRQLN*LAGRPSR-GLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDA 572
++K Q +G + L GR ++ GL+ + + N LVE+NCETDFV++N KFQ +++
Sbjct: 82 LHKEAQKEGWSKAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQV 141
Query: 573 AIASFKF---------AHTKLQAKGPIT----------KME--LDSEQLGTLHAEGGKK- 686
A+ + A++K+Q P+ +E L+S +L L A ++
Sbjct: 142 ALGTMMHCQTLKDQPSAYSKVQWLTPVNLALWEAEAGGSLEGFLNSSELSGLPAGPDREG 201
Query: 687 -LSEILALFIGSVGENAVLRRAECWKANSEDVXIAGYTHPA--PXXXXXXXXGKYGALL 854
L + LAL IG +GEN +L+RA W + Y H A GKYGAL+
Sbjct: 202 SLKDQLALAIGKLGENMILKRA-AWVKVPSGFYVGSYVHGAMQSPSLHKLVLGKYGALV 259
>Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein.
Length = 715
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
>BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
>BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
>AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein.
Length = 685
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
>AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
>AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
>AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
>AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
>AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein
protein.
Length = 685
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 233 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 412
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 413 MGWAKATKLAGRTALQGVGS 472
A +A R A+ S
Sbjct: 327 RFLQSAKNIAERVAMATASS 346
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,225,597
Number of Sequences: 237096
Number of extensions: 2644979
Number of successful extensions: 8489
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8485
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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