Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_M09
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0259 - 1996427-1998772                                           31   1.2  
01_07_0108 - 41126074-41127342                                         30   2.8  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   3.8  
05_03_0469 + 14439472-14440905                                         29   6.6  
11_04_0358 + 16725417-16725422,16725789-16725858,16727825-167286...    28   8.7  
05_03_0618 - 16262826-16263097,16263111-16263183                       28   8.7  
03_02_0950 + 12661008-12662312,12662403-12662576                       28   8.7  
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924...    28   8.7  
01_01_0459 + 3400288-3400729,3400760-3400806,3401055-3401141,340...    28   8.7  

>03_01_0259 - 1996427-1998772
          Length = 781

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 403 IFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSK 507
           I  ++ V++ N   HHALKLI + +  +I  GDSK
Sbjct: 732 ILVKKNVRICN-HCHHALKLISRYSGRRIVVGDSK 765


>01_07_0108 - 41126074-41127342
          Length = 422

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
 Frame = -1

Query: 684 WCLKGVSGAITVDDTVITRTFRVIELQV-------LFVLGGHDLEVNSVVFQHGGKLPGD 526
           W + G +  + VDD   T  F  +E++          V+GGH +E N VVF    +  G 
Sbjct: 345 WYIFGGNSLVQVDDA--TACFAFVEMRPEKVGYGPAVVIGGHQMEHNLVVFDEEKQQLG- 401

Query: 525 FLAGFVFGV-TECN 487
             +G +FG+ T C+
Sbjct: 402 -FSGLLFGLQTTCS 414


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 471 LVDQLEGVMVPFVYELDSLLGEDHSKLDG 385
           +V    GVM P + +L  LLGE+++KL G
Sbjct: 7   IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35


>05_03_0469 + 14439472-14440905
          Length = 477

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +2

Query: 497 VTPKTKPARKSPGS--LPPCWKTTEFTSRSCPP 589
           +T  T+ AR  PG+  +PP W+    T+RS PP
Sbjct: 187 LTAVTEFARGVPGAPTVPPVWEREALTTRSWPP 219


>11_04_0358 +
           16725417-16725422,16725789-16725858,16727825-16728693,
           16729109-16729198,16730071-16730356,16730573-16730592
          Length = 446

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -1

Query: 648 DDTVITRTFRVIELQVLFVLGGHDLEVNSVVFQHGGKLPGDFLAGFVFG 502
           DDT       V+  ++  VLGG D+    V F  GG +    L GF+FG
Sbjct: 155 DDTTTEDDLMVVSAELEKVLGGVDVASARVSFAMGGGVDCP-LQGFLFG 202


>05_03_0618 - 16262826-16263097,16263111-16263183
          Length = 114

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 170 SSWCKCGVRSQRTHGEDEGKQSQSHLGAV 84
           S  C+CG+RS+R    +E +  +  LG V
Sbjct: 24  SGHCRCGLRSRRCTAREEFRSKEEMLGIV 52


>03_02_0950 + 12661008-12662312,12662403-12662576
          Length = 492

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 174 DVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEV 275
           +VL+ +      +GEY+ AIA CS+ L++ K  V
Sbjct: 411 EVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNV 444


>01_05_0346 +
           21191542-21191783,21191988-21192072,21192159-21192422,
           21192518-21192820,21193695-21193799,21193916-21194020,
           21194613-21194712,21195614-21195933,21196183-21196359,
           21196432-21196560,21196592-21196636,21196851-21197078
          Length = 700

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 487 IAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNT 621
           I F D K+K  K    K    +EN+ + F +M+  D QYL  +NT
Sbjct: 354 ILFNDMKEKGVKSGK-KCVLSMENHGIGFLLMAYNDVQYLVPNNT 397


>01_01_0459 +
           3400288-3400729,3400760-3400806,3401055-3401141,
           3401230-3401561,3401648-3401807,3402155-3402223,
           3403165-3403263
          Length = 411

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/61 (29%), Positives = 24/61 (39%)
 Frame = -1

Query: 192 AAPPVRHQFLVQVWR*KPAHTRRGRRQTKSISSWXSGYL*KQSQTLNXYXRGSPKXXXXG 13
           A PP R + L           RR  R  +  + W +G L  Q Q      RG+P+    G
Sbjct: 54  ARPPPRRRRLGLATASARLRRRRAGRACRLGAGWLAGLLLLQGQICGPERRGAPRARVLG 113

Query: 12  G 10
           G
Sbjct: 114 G 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,524,605
Number of Sequences: 37544
Number of extensions: 398526
Number of successful extensions: 1210
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)