Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_M09
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 33 0.27
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 31 0.83
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 30 1.9
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 30 1.9
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.4
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 7.7
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 7.7
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 28 7.7
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 28 7.7
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 28 7.7
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 28 7.7
AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 503 PKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST*SSITRKVLVMTVSSTVIA 661
PKT+P P ++P CW+ F PPR N+T I K + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 494 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT 670
+VT T ++P TT S + PP ++T + +T+ V ST IAP+T
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVT 465
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 192 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLI 302
LYM +G+Y+ A KC +Y K+ G+ EA++ I
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYI 124
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTAR 122
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTAR 122
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 278 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 114
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +1
Query: 400 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 555
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 556 NNRVYFKIMSTEDK 597
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +1
Query: 400 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 555
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 556 NNRVYFKIMSTEDK 597
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = -3
Query: 238 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVNLILXQ 86
+A +S + +T++ + ++STSS++GA+ A A A + + + + +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = -3
Query: 238 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVNLILXQ 86
+A +S + +T++ + ++STSS++GA+ A A A + + + + +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = -3
Query: 238 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVNLILXQ 86
+A +S + +T++ + ++STSS++GA+ A A A + + + + +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = -3
Query: 238 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVNLILXQ 86
+A +S + +T++ + ++STSS++GA+ A A A + + + + +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical
protein K07H8.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +1
Query: 316 GTPWXFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAF 495
G FA Q W D K +K+ IQ+ TE+ + N + + ++N N++
Sbjct: 239 GADTHFAPQTWYCDMKNNIKNSTVIQYSSTGTEKIKMIDNLLTVFKNRNVPEENLNEVRE 298
Query: 496 GDSKDKTSKKVS 531
SK KT S
Sbjct: 299 ELSKGKTQHSTS 310
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,958,253
Number of Sequences: 27780
Number of extensions: 336272
Number of successful extensions: 1093
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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