Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_M07
(967 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 3e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 41 3e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.026
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.080
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.14
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.18
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.42
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.56
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 1.3
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 27 3.0
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 27 4.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 5.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.9
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 6.9
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 26 9.1
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.7 bits (91), Expect = 3e-04
Identities = 29/114 (25%), Positives = 35/114 (30%), Gaps = 3/114 (2%)
Frame = +3
Query: 612 PPPXPPSXXPXYXXXPXPXPPHXXPXXXXP---PXXXQXPPXXXXXXXXXXXXXXPXXPP 782
PPP PP P P P P P + PP P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 783 TXXXXPXPPXXHHQXPXXPXATTXPAPXXASXPASPPSXXXAPPHTPAXXPXXP 944
PP + P T P+ ++ P+ PPS APP P P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPS---APPSLPMGAPAAP 447
Score = 35.5 bits (78), Expect = 0.011
Identities = 27/103 (26%), Positives = 29/103 (28%)
Frame = +3
Query: 582 PPXXXPXXPXPPPXPPSXXPXYXXXPXPXPPHXXPXXXXPPXXXQXPPXXXXXXXXXXXX 761
PP P P P P P PP P P PP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP-PSLPPSAPPSLPMGAPAA--- 446
Query: 762 XXPXXPPTXXXXPXPPXXHHQXPXXPXATTXPAPXXASXPASP 890
P PP+ P P P P A P P A PA+P
Sbjct: 447 --PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 35.1 bits (77), Expect = 0.015
Identities = 27/97 (27%), Positives = 27/97 (27%), Gaps = 8/97 (8%)
Frame = +2
Query: 569 PPPXP--------PXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPP 724
PPP P P P PPPPPP P P P S A P PP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL------SSSRAVSNPPAPP 392
Query: 725 XXHPXXXXXXXXXXXXXXXXXXPXPPPPXXTPPXPXP 835
P P P P PP P
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 33.1 bits (72), Expect = 0.060
Identities = 32/127 (25%), Positives = 35/127 (27%), Gaps = 16/127 (12%)
Frame = +3
Query: 612 PPPXPPSXXPXYXXXPXPX--------PPHXXPXXXXPPXXXQXPPXXXXXXXXXXXXXX 767
PPP PP P P P PP P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 768 PXXPPTXXXXPXP------PXXHHQXPXXPXATTXPAPXXASXPASP--PSXXXAPPHTP 923
P PP+ P P P P + P A PA+P P APP P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 924 AXXPXXP 944
A P P
Sbjct: 481 APAPAAP 487
Score = 32.7 bits (71), Expect = 0.080
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Frame = +3
Query: 597 PXXPXPPPXPPSXXPXYXXXPXPXPPHXXPXXXX-PPXXXQXPPXXXXXXXXXXXXXXPX 773
P P PP PPS P P P P PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM---------PA 465
Query: 774 XPPTXXXXPXPPXXHHQXPXXPXATTXPAP 863
PP P PP P P A+ P
Sbjct: 466 APPLPPAAPAPPPAPAPAPAAPVASIAELP 495
Score = 28.7 bits (61), Expect = 1.3
Identities = 26/111 (23%), Positives = 28/111 (25%), Gaps = 13/111 (11%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPP--PP---------PPLXXPXXPXXPXPXPXXXXPXXSXATPXXP 715
PPP PP PP PP P + P P P + P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPP 312
Query: 716 XPPXXHPXXXXXXXXXXXXXXXXXXPXPPPPXXTP--PXPXPPHXXHXPRP 862
PP P PPPP P PP P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
Frame = +2
Query: 569 PPPXPPX-PXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPPXXHP 736
PP PP P P PPL P P P A P P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXX-PXXSXATPXXPXPPXXHP 736
PP PP PP PP P P P P P + A P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPP-SAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/60 (28%), Positives = 17/60 (28%), Gaps = 5/60 (8%)
Frame = +2
Query: 572 PPXPPXPXXXXXXPPPPPPLXXPXXP-----XXPXPXPXXXXPXXSXATPXXPXPPXXHP 736
PP P P PP PP P P P P P P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 25.8 bits (54), Expect = 9.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 572 PPXPPXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXA 700
P PP P PP PP P P P P P S A
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPP----PAPAPAPAAPVASIA 492
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 40.7 bits (91), Expect = 3e-04
Identities = 33/128 (25%), Positives = 34/128 (26%), Gaps = 2/128 (1%)
Frame = +3
Query: 582 PPXXXPXXPXPPPXPPSXXPXYXXXPXPXPPHXXPXXXXPPXXXQXP-PXXXXXXXXXXX 758
P P P P PP P P P P P P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 759 XXXPXXPPTXXXXPXPPXXHHQXPXXPXATTXPAP-XXASXPASPPSXXXAPPHTPAXXP 935
P PP P P P P +T P P A P P APP PA
Sbjct: 1186 AGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP-VPAPSS 1244
Query: 936 XXPHXHXP 959
P P
Sbjct: 1245 EAPSVSTP 1252
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/100 (25%), Positives = 27/100 (27%), Gaps = 2/100 (2%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPPLXXP--XXPXXPXPXPXXXXPXXSXATPXXPXPPXXHPXX 742
P PP P P PPP+ P P P P P S P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 743 XXXXXXXXXXXXXXXXPXPPPPXXTPPXPXPPHXXHXPRP 862
P P P PP P P P+P
Sbjct: 1106 KPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 38.7 bits (86), Expect = 0.001
Identities = 28/102 (27%), Positives = 30/102 (29%), Gaps = 8/102 (7%)
Frame = +2
Query: 581 PPXPXXXXXXPPPP-----PPLXXPXXPXXPXPXPXXXXPXX--SXATPXXPXPPXXHP- 736
PP P PP P PP+ P P P P P S A P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 737 XXXXXXXXXXXXXXXXXXPXPPPPXXTPPXPXPPHXXHXPRP 862
P P P PP P P P+P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/106 (27%), Positives = 30/106 (28%), Gaps = 8/106 (7%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPP-----PPLXXPXXPXXPXPXPXXXXPXX--SXATPXXPXP-P 724
P PP P PP P PP+ P P P P P S A P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 725 XXHPXXXXXXXXXXXXXXXXXXPXPPPPXXTPPXPXPPHXXHXPRP 862
P P P P PP P P P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 37.1 bits (82), Expect = 0.004
Identities = 32/124 (25%), Positives = 33/124 (26%), Gaps = 2/124 (1%)
Frame = +3
Query: 582 PPXXXPXXPXPPPXPPSXXPXYXXXPXPXPPHXXPXXXXPPXXXQXPPXXXXXXXXXXXX 761
PP P PP PS P PP P PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK---PAAGVPPVPPPSE 1196
Query: 762 XXPXXPPTXXXXPXPPXXHHQXPXXPXATTXPAP-XXASXPASPPSXXXAPP-HTPAXXP 935
P P+ P PP P A P P A P P AP TP
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSV 1256
Query: 936 XXPH 947
PH
Sbjct: 1257 PSPH 1260
Score = 36.7 bits (81), Expect = 0.005
Identities = 30/123 (24%), Positives = 33/123 (26%), Gaps = 3/123 (2%)
Frame = +3
Query: 585 PXXXPXXPXPPPXPPSXXPXYXXXPXPXPPHXXPXXXXPPXXXQXP-PXXXXXXXXXXXX 761
P P P P PP P P P P P P P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 762 XXPXXPPTXXXXPXP-PXXHHQXPXXPXAT-TXPAPXXASXPASPPSXXXAPPHTPAXXP 935
P P+ P P P P A PAP P P+ P P+ P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Query: 936 XXP 944
P
Sbjct: 1199 PVP 1201
Score = 35.9 bits (79), Expect = 0.009
Identities = 29/123 (23%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Frame = +3
Query: 582 PPXXXPXXPXPPPXPPSXXPXYXXXPXPXPPHXXPXXXXPPXXXQXP-PXXXXXXXXXXX 758
PP P P P S P P P P P P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPS-APPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 759 XXXPXXPPTXXXXPXPPXXHHQXPXXPXATTXPAPXXASXPASPPSXXXAPP-HTPAXXP 935
P P+ P P P P P + P P APP P+ P
Sbjct: 1100 AAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Query: 936 XXP 944
P
Sbjct: 1160 PVP 1162
Score = 33.9 bits (74), Expect = 0.034
Identities = 22/86 (25%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = +2
Query: 581 PPXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXS-XATPXXPXPPXXHPXXXXXXX 757
PP P PP P P P P P + A P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 758 XXXXXXXXXXXPXPPPPXXTPPXPXP 835
P P P PP P P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 32.7 bits (71), Expect = 0.080
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +2
Query: 569 PPPX--PPXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPPXXHP 736
PPP PP P PP PPP P P P P + P P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP--PVPVPTAKAPPVPAPSSEAP 1247
Score = 31.9 bits (69), Expect = 0.14
Identities = 28/124 (22%), Positives = 30/124 (24%), Gaps = 3/124 (2%)
Frame = +3
Query: 582 PPXXXPXXPXPPPXPPSXXPXYXXXPXPXPPHXXPXXXXPPXXXQXPPXXXXXXXXXXXX 761
P P P P P P P P P P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Query: 762 XXPXXPPTXXXXPXPPXXHHQXP--XXPXATTXPAPXXASXPASP-PSXXXAPPHTPAXX 932
P P P P P P A P P + P P PS P P+
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 933 PXXP 944
P P
Sbjct: 1217 PPVP 1220
Score = 31.5 bits (68), Expect = 0.18
Identities = 30/119 (25%), Positives = 31/119 (26%), Gaps = 4/119 (3%)
Frame = +3
Query: 615 PPXPPSXXPXYXXXPXPXPPHXXPXXXXPPXXXQXPPXXXXXXXXXXXXXXPXXPPTXXX 794
P PPS P P P PP P P P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARV--PPVPKLSSK 1020
Query: 795 XPXPPXXHHQXPXXPX-ATTXPAPXXASXPASPPS---XXXAPPHTPAXXPXXPHXHXP 959
P P P P +T P P S P P S APP PA P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Score = 30.3 bits (65), Expect = 0.42
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 581 PPXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXS--XATPXXPXPPXXHP 736
PP P PP PPP P P P P + TP PP P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 29.1 bits (62), Expect = 0.98
Identities = 26/111 (23%), Positives = 30/111 (27%), Gaps = 2/111 (1%)
Frame = +3
Query: 582 PPXXXPXXPXPPPX-PPSXXPXYXXXPXPXPPHXXPXXXXPPXXXQXPPXXXXXXXXXXX 758
P P P P PP P P P P P PP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Query: 759 XXXPXXP-PTXXXXPXPPXXHHQXPXXPXATTXPAPXXASXPASPPSXXXA 908
P P PT P P ++ P+P + P SP S A
Sbjct: 1224 AGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASP-SPTSSSMA 1273
Score = 29.1 bits (62), Expect = 0.98
Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +2
Query: 572 PPXPPXPXXXXXXPPPP--PPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXP 721
PP P PPP PP+ P P P P P + + P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +2
Query: 572 PPXPPXPXXXXXXPPPP---PPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXP 721
PP PP P P P PP+ P P P P P S P P
Sbjct: 1208 PPVPP-PSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.009
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 575 PXPPXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPP 724
P PP P P P P P P P P P + A P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.7 bits (76), Expect = 0.020
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPP 628
PPP PP P PPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPP 780
Score = 33.9 bits (74), Expect = 0.034
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 572 PPXPPXPXXXXXXPPPPPPLXXPXXPXXPXPXP 670
P PP P PPPPPP P P P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.1 bits (67), Expect = 0.24
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPP 628
PPP PP PPPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPP 781
Score = 31.1 bits (67), Expect = 0.24
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPP 628
PPP PP PPPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.42
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPPLXXPXXPXXPXPXP 670
P P PP PPPPPP P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 0.98
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 582 PPXXXPXXPXPPPXPPSXXPXYXXXPXPXPP 674
PP P PPP PP P P PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.98
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 572 PPXPPXPXXXXXXPPPPPPLXXP 640
PP PP P PPPPP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +2
Query: 569 PPPXP----PXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPP 724
PPP P P P PPP P+ P P P P P P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP-----PPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +2
Query: 569 PPPXP-PXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXS 694
P P P P P PPPPPP P P P P S
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPP--PPGVAGAGPPPPPPPPPAVS 786
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 828 PXXPXATTXPAPXXASXPASPPSXXXAPPHTPAXXP 935
P P A P P A P PP+ P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.026
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = -2
Query: 723 GGIGXXGVAXXLXGXXXXGXGX--GXXGXXGXXRGGGGGGXXXLXXGXGGXGGG 568
GG G G G G G G G G GG GGG G GG GGG
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 29.9 bits (64), Expect = 0.56
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = -1
Query: 724 GGXWXXXGGXXXXGXXXGGXGX-GXXXXXGXXEGGXGGGXGXXGXXXGGXXGGGG 563
GG GG GG G G GG GGG G GG GG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -2
Query: 723 GGIGXXGVAXXLXGXXXXGXGXGXXGXXGXXRGGGGGGXXXLXXGXGGXGG 571
GG+ G+A G G G G GG GG G GG GG
Sbjct: 164 GGLALGGLASHALGNLFHHRGHNGGGFGGFG--GGSGGPPPGPGGFGGFGG 212
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.7 bits (71), Expect = 0.080
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 724 GGXWXXXGGXXXXGXXXGGXGXGXXXXXGXXEGGXGGGXGXXGXXXGGXXGGGG 563
GG GG G GG G GG GG G G GG G G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 28.3 bits (60), Expect = 1.7
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Frame = -1
Query: 673 GGXGXGXXXXXGXXEGGXGGGXGXXGXXXGGXXGG--GGVXCXG*SRXXXXXXXVXXGXG 500
GG G G G GG GG G G GG GG GG G +R G
Sbjct: 9 GGRG-GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG-- 65
Query: 499 TGXKGSXTVV 470
G KG V+
Sbjct: 66 -GAKGGAKVI 74
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 630 RGGGGGGXXXLXXGXGGXGGG 568
RGG GG G GG GGG
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGG 31
Score = 26.2 bits (55), Expect = 6.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 735 GWXXGGIGXXGVAXXLXGXXXXGXGXGXXGXXGXXRGGGGGGXXXLXXGXGGXGG 571
G GG G G G G G RGG GG GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 777 PPTXXXXPXPPXXHHQXPXXPXATTXPAPXXASXPASPPSXXXAPPHTPA 926
PP PP P P + P P PA PPS PP PA
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPS--APPPPLPA 1737
Score = 29.5 bits (63), Expect = 0.74
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Frame = +2
Query: 569 PP--PXPPXPXXXXXXPPPPPPLXXPXXPXXP----XPXPXXXXPXXSXATPXXPXP 721
PP P P PPPPP+ P P P P P + + P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 606 PXPPPXPPSXXPXYXXXPXPXPPHXXPXXXXP 701
P PPP P S P P P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.18
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPP 628
PPP PP P PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 31.1 bits (67), Expect = 0.24
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPP 628
PPP PP PPPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 30.3 bits (65), Expect = 0.42
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPP 628
PPP PP PPPPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.74
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 597 PXXPXPPPXPPSXXPXYXXXPXPXP 671
P P PPP PP P P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 572 PPXPPXPXXXXXXPPPPPPLXXPXXPXXPXP 664
PP P P PPPPP P P P P
Sbjct: 5 PPGNPPP------PPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 5.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 791 PXPPPPXXTPPXPXPP 838
P PPPP PP PP
Sbjct: 11 PPPPPPGFEPPSQPPP 26
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.42
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +2
Query: 569 PPPXPPX-PXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPP 724
PPP P P PP P L P P P P S P P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 29.5 bits (63), Expect = 0.74
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Frame = +2
Query: 569 PP--PXPPXPXXXXXXPP--PPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPPXXHP 736
PP P PP P P PP P P P P P P S P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP--PAQPAAPV 181
Query: 737 XXXXXXXXXXXXXXXXXXPXPPPPXXTPP 823
PPPP P
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 25.8 bits (54), Expect = 9.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPP 622
PPP PP P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 9.1
Identities = 17/64 (26%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Frame = +3
Query: 777 PPTXXXXPXPPXXHHQXPXXPXATTXPAPXXASXPASPPSXXXAPPH-TPAXXPXXPHXH 953
PP+ P P P + P P AS P P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 954 XPXA 965
P A
Sbjct: 184 PPSA 187
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/47 (27%), Positives = 17/47 (36%)
Frame = +3
Query: 804 PPXXHHQXPXXPXATTXPAPXXASXPASPPSXXXAPPHTPAXXPXXP 944
PP P P + P P PA P + +PP P+ P
Sbjct: 150 PPPSPASAPPIP-SKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/55 (25%), Positives = 16/55 (29%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPPXXH 733
PP P P P P P P P P + + P PP H
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGH 227
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.56
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = -1
Query: 700 GXXXXGXXXGGXGXGXXXXXGXXEGGXGGG--XGXXGXXXGGXXGG 569
G G GG G G GG GGG G G GG GG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 684 GXXXXGXGXGXXGXXGXXRGGGGGGXXXLXXGXGGXGGG 568
G G G G G RGG GGG GG GGG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGG------SRGGFGGG 173
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPPLXXPXXPXXPXPXP 670
P P P P PPPPP+ P P P P
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMP-PAP 761
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 837 PXATTXPAPXXASXPASPPSXXXAPPHTPAXXP 935
P T +P P++P S PP TP+ P
Sbjct: 222 PQTTQDSSPILTMAPSTPVSVGSTPPSTPSVLP 254
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/52 (26%), Positives = 16/52 (30%)
Frame = +3
Query: 768 PXXPPTXXXXPXPPXXHHQXPXXPXATTXPAPXXASXPASPPSXXXAPPHTP 923
P PPT P HH P P P SP + H+P
Sbjct: 161 PPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSP 212
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 5.2
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 584 PXPXXXXXXPPPPPPLXXP 640
P P PPPPPP+ P
Sbjct: 347 PTPQVQGSRPPPPPPMPAP 365
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 612 PPPXPPSXXPXYXXXPXPXPPHXXPXXXXPP 704
PPP PP P Y P P P P
Sbjct: 356 PPPPPPMPAPIYNVPNVPTVPTVSPNPFLQP 386
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = +2
Query: 569 PPPXPPXPXXXXXXPPPPPPLXXPXXPXXPXPXPXXXXPXXSXATPXXPXPPXXHP 736
PP P PPPPPP P P + + PP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATP 279
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 42 LPXSLMCSKNLQKQ*TAAVIKEHEYFKIFLCFYCGNALWC 161
LP L+ +N+ ++ V + +FLC Y GN L C
Sbjct: 310 LPRPLLSCQNVFQKSIGDVCWSPDGLSLFLCSYDGNVLVC 349
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 188 FLLERLYYMTPESIATIKTKKNFEIFMFFNNCGGLLFLQIFRT 60
+++E + T +S TI TK+N FM CG + +Q +T
Sbjct: 266 YIVEYVTCKTCKSPDTILTKENRIFFMTCEACGSVRSVQAIKT 308
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,263,638
Number of Sequences: 5004
Number of extensions: 37912
Number of successful extensions: 483
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 495302128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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