Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_M04
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085...    29   3.7  
12_01_1077 - 11193337-11193405,11194961-11195122,11195809-111963...    28   8.5  
06_03_1274 + 28897491-28897707,28897804-28897935,28898029-288980...    28   8.5  

>04_04_1263 -
           32207636-32207938,32208020-32208170,32208263-32208500,
           32208604-32208814,32208927-32209108,32209196-32209297,
           32210002-32211187,32212103-32212499,32212551-32212582,
           32212885-32213157,32213307-32213394,32213486-32213723,
           32213824-32214034,32214119-32214300,32214378-32214479,
           32214801-32216224,32216751-32216822,32217688-32217719,
           32218186-32218263,32218425-32218512,32218608-32218845,
           32219060-32219162,32219386-32219558,32219644-32219745,
           32219825-32220606,32220659-32221012,32224055-32224140,
           32224250-32224400,32224534-32224771,32224876-32225119,
           32225190-32225368,32225577-32225675,32225835-32227083
          Length = 3195

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
 Frame = +2

Query: 239 SLEYESQGKGSIIQNVVNNLIIDKRRNTME------YCYKLWV-GNGQEIVRKYFPLNFX 397
           S++ ++   G ++  +V+ L I   + T        Y ++LW  GN  E++ K+F  ++ 
Sbjct: 684 SVKSDTYSFGVLLLEIVSGLKISSSKLTPNFFSLTAYAWRLWKDGNATELLDKFFVDSYP 743

Query: 398 THHGRKLCQ--DHLQKLQP 448
            H     CQ  D L   +P
Sbjct: 744 LHEAFSFCQSDDRLTPAKP 762


>12_01_1077 -
           11193337-11193405,11194961-11195122,11195809-11196324,
           11198132-11198248,11198376-11198545,11199676-11199757,
           11200515-11200624,11201264-11201342
          Length = 434

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 93  HFVRSLSRSPSSLQITYLRGSL 28
           HF++  SRSP SL + Y+  SL
Sbjct: 100 HFLKEASRSPPSLHVIYINTSL 121


>06_03_1274 +
           28897491-28897707,28897804-28897935,28898029-28898096,
           28898216-28898280,28898468-28898534,28898630-28898917,
           28898995-28899102,28899236-28899487,28899918-28899997,
           28900092-28900185,28900728-28900810,28901319-28901873,
           28902085-28902616
          Length = 846

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 718 YENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPD 849
           Y   V FF YN+ F+  + + T+V  +G+  ++G  G +  L D
Sbjct: 764 YSGSVGFFSYNKTFDLNIVIRTVVLHNGE-ASIGAGGAIVALSD 806


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,775,721
Number of Sequences: 37544
Number of extensions: 438988
Number of successful extensions: 1236
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)