Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_L19
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0515 - 3864796-3865425                                           31   1.2  
02_05_0584 - 30135768-30135790,30136104-30136866                       29   3.8  
12_01_0899 - 8689125-8689383,8689540-8689826                           29   6.6  
11_06_0610 - 25449085-25453284                                         29   6.6  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   8.7  

>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 22/68 (32%), Positives = 24/68 (35%)
 Frame = +3

Query: 267 APXXHXSPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQXSAS 446
           +P    SP     P S TS  P    A GP         S      P   P P P  +AS
Sbjct: 41  SPPTEASPPPLAPPPSVTSSPPP--PAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAAS 98

Query: 447 XVPXPPWP 470
             P PP P
Sbjct: 99  PPPPPPSP 106


>02_05_0584 - 30135768-30135790,30136104-30136866
          Length = 261

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
 Frame = +3

Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGG---PCXXPRPXPQXSASXVP 455
           SPA    P S +SG P    +  P  + G     +    G   P   P P PQ S+   P
Sbjct: 108 SPAAGAPPSSGSSGFPFPMPSPLPLPAHGSPAAGAPPSSGSGLPFPLPFPLPQPSSPAQP 167

Query: 456 XP 461
            P
Sbjct: 168 QP 169


>12_01_0899 - 8689125-8689383,8689540-8689826
          Length = 181

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
 Frame = +3

Query: 384 SSQXQGGPCXXPRPXPQXSASXVPXPPWPCRXLLXXXPEXXW-QRLXPXAXRXRTXPSXP 560
           S   +G     P P P  +   +P PPW    L    PE  W     P A      PS P
Sbjct: 23  SGAARGAVARLPLPEPPCARLLLPEPPWGMAAL---PPEPPWGAAAHPPAPHWGAGPSRP 79


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 25/91 (27%), Positives = 31/91 (34%), Gaps = 1/91 (1%)
 Frame = +3

Query: 201 PESX*SPPGXSXQXXXRXP*SXAPXXHX-SPAXXRTPXSXTSGIPARXSARGPXXSXGGX 377
           P S  SPP  + +     P    P  H  SP     P   +   P   S+  P  +  G 
Sbjct: 645 PPSEKSPP--TPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSPPPPAPEGH 702

Query: 378 XXSSQXQGGPCXXPRPXPQXSASXVPXPPWP 470
             S      P     P P+  AS  P PP P
Sbjct: 703 MPSPPKSTPPVEKSPPTPESEASS-PPPPAP 732


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 3/104 (2%)
 Frame = +3

Query: 279 HXSPAXXRTP-XSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQXS-ASXV 452
           H SP+  + P  S T+  P       P  S G     S     P   P P PQ + AS  
Sbjct: 526 HESPSDRKLPSPSPTAAAPPPPPPPPPPPS-GNKPAFSPPPPPPPPPPPPLPQSNYASSQ 584

Query: 453 PXPPWPCRXL-LXXXPEXXWQRLXPXAXRXRTXPSXPCXXPVLP 581
           P PP P   L     P        P     R+ P  P   P LP
Sbjct: 585 PPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLP 628


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,091,145
Number of Sequences: 37544
Number of extensions: 100767
Number of successful extensions: 221
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)