Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_L19
(884 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein. 30 9.7
U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein. 30 9.7
D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein. 30 9.7
D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein. 30 9.7
BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating p... 30 9.7
BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein. 30 9.7
BC001241-1|AAH01241.1| 115|Homo sapiens ARHGAP17 protein protein. 30 9.7
AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein pr... 30 9.7
AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens ... 30 9.7
AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens ... 30 9.7
AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens ... 30 9.7
AK001170-1|BAA91532.1| 142|Homo sapiens protein ( Homo sapiens ... 30 9.7
AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein. 30 9.7
AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant prot... 30 9.7
>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
Length = 1190
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 288 PAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGG-PCXXPRPXPQXSASXVPXPP 464
PA P S S A GP S SS QG PC P P + P PP
Sbjct: 546 PAHLPPPHSQVSYSQA--GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 603
Query: 465 WP 470
P
Sbjct: 604 VP 605
>U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein.
Length = 1184
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 288 PAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGG-PCXXPRPXPQXSASXVPXPP 464
PA P S S A GP S SS QG PC P P + P PP
Sbjct: 540 PAHLPPPHSQVSYSQA--GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 597
Query: 465 WP 470
P
Sbjct: 598 VP 599
>D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein.
Length = 1182
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 288 PAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGG-PCXXPRPXPQXSASXVPXPP 464
PA P S S A GP S SS QG PC P P + P PP
Sbjct: 541 PAHLPPPHSQVSYSQA--GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 598
Query: 465 WP 470
P
Sbjct: 599 VP 600
>D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein.
Length = 1185
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 288 PAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGG-PCXXPRPXPQXSASXVPXPP 464
PA P S S A GP S SS QG PC P P + P PP
Sbjct: 541 PAHLPPPHSQVSYSQA--GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 598
Query: 465 WP 470
P
Sbjct: 599 VP 600
>BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating
protein 17 protein.
Length = 881
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQ-XSASXVPXP 461
+P TP S S P GG ++Q G PRP P+ + VP P
Sbjct: 753 TPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 812
Query: 462 PWP 470
P P
Sbjct: 813 PQP 815
>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
Length = 1191
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 288 PAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGG-PCXXPRPXPQXSASXVPXPP 464
PA P S S A GP S SS QG PC P P + P PP
Sbjct: 547 PAHLPPPHSQVSYSQA--GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 604
Query: 465 WP 470
P
Sbjct: 605 VP 606
>BC001241-1|AAH01241.1| 115|Homo sapiens ARHGAP17 protein protein.
Length = 115
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQ-XSASXVPXP 461
+P TP S S P GG ++Q G PRP P+ + VP P
Sbjct: 28 TPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 87
Query: 462 PWP 470
P P
Sbjct: 88 PQP 90
>AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein
protein.
Length = 414
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQ-XSASXVPXP 461
+P TP S S P GG ++Q G PRP P+ + VP P
Sbjct: 286 TPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 345
Query: 462 PWP 470
P P
Sbjct: 346 PQP 348
>AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens
cDNA FLJ43368 fis, clone NT2RP8000483, moderately
similar to Rattus norvegicus mRNA for Nadrin E2. ).
Length = 608
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQ-XSASXVPXP 461
+P TP S S P GG ++Q G PRP P+ + VP P
Sbjct: 480 TPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 539
Query: 462 PWP 470
P P
Sbjct: 540 PQP 542
>AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ14661 fis, clone NT2RP2002710, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 803
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQ-XSASXVPXP 461
+P TP S S P GG ++Q G PRP P+ + VP P
Sbjct: 675 TPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 734
Query: 462 PWP 470
P P
Sbjct: 735 PQP 737
>AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 726
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQ-XSASXVPXP 461
+P TP S S P GG ++Q G PRP P+ + VP P
Sbjct: 598 TPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 657
Query: 462 PWP 470
P P
Sbjct: 658 PQP 660
>AK001170-1|BAA91532.1| 142|Homo sapiens protein ( Homo sapiens
cDNA FLJ10308 fis, clone NT2RM2000260. ).
Length = 142
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQ-XSASXVPXP 461
+P TP S S P GG ++Q G PRP P+ + VP P
Sbjct: 28 TPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 87
Query: 462 PWP 470
P P
Sbjct: 88 PQP 90
>AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein.
Length = 803
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 SPAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGGPCXXPRPXPQ-XSASXVPXP 461
+P TP S S P GG ++Q G PRP P+ + VP P
Sbjct: 675 TPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 734
Query: 462 PWP 470
P P
Sbjct: 735 PQP 737
>AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant
protein.
Length = 774
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 288 PAXXRTPXSXTSGIPARXSARGPXXSXGGXXXSSQXQGG-PCXXPRPXPQXSASXVPXPP 464
PA P S S A GP S SS QG PC P P + P PP
Sbjct: 130 PAHLPPPHSQVSYSQA--GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 187
Query: 465 WP 470
P
Sbjct: 188 VP 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,061,053
Number of Sequences: 237096
Number of extensions: 614331
Number of successful extensions: 1308
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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