Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_L18
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70284-15|CAD01085.1|   73|Caenorhabditis elegans Hypothetical p...    41   0.001

>Z70284-15|CAD01085.1|   73|Caenorhabditis elegans Hypothetical
           protein K07F5.15 protein.
          Length = 73

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +3

Query: 198 IFNFQXXXXXXXXXICTCAYLRSF--FPSIMDRNKTGLLXTFWKCARIGERKSPYVAVCC 371
           +++F          ICTCAYL+      S +   K G    F+K A IG R    VA+ C
Sbjct: 3   VYSFDGLVVAALLFICTCAYLKRVPRVSSWLLSEKKGFFGVFYKAAVIGVRLHSLVALSC 62

Query: 372 ILMAFSILFL 401
           +  A  +LF+
Sbjct: 63  LSAAVYVLFV 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,916,088
Number of Sequences: 27780
Number of extensions: 216445
Number of successful extensions: 268
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)