Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_L16
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23H4.06 |gln1||glutamate-ammonia ligase Gln1|Schizosaccharom... 89 8e-19
SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+] |Schizosacc... 28 2.0
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 26 6.1
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 26 6.1
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 26 8.1
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 26 8.1
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 26 8.1
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 26 8.1
>SPAC23H4.06 |gln1||glutamate-ammonia ligase
Gln1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 359
Score = 89.0 bits (211), Expect = 8e-19
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGP 835
P+GP+YCGVG +VFARD++EAHYK CLYAG+ I+G NAE M SQWE + GP
Sbjct: 158 PQGPFYCGVGTGRVFARDIVEAHYKACLYAGINISGINAEVMPSQWEYQVGP 209
Score = 79.0 bits (186), Expect = 8e-16
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = +1
Query: 472 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 651
PFRRG+++LV+ Y P NHR C + ++ D E WFGIEQEY +LD RPF
Sbjct: 89 PFRRGDNILVLAACYTADGSPNGFNHRDACAKLLEKHADKETWFGIEQEYTMLDYYDRPF 148
Query: 652 GWPTTGSPPAQG 687
GWP G P QG
Sbjct: 149 GWPKGGFPGPQG 160
Score = 53.6 bits (123), Expect = 4e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 231 LSKT-LLDRYRDLPLPEDKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXX 407
LSK +L++Y DLP KV+A Y+WIDG H+R K TL+ P + L +WN+
Sbjct: 10 LSKAAILNKYADLP-QNGKVMAEYIWIDGF-NHLRSKTMTLDAKPSSIDQLRVWNFDGSS 67
Query: 408 XXXXXXXXXXXHLKPQAIYRXP 473
LKP A+Y P
Sbjct: 68 TGQAPGNNSDTLLKPVAMYNDP 89
>SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+]
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 135 AVLEKCRKLKTKCKTIQKFYXGPVL-KNSPNAFLSKTLLDRYRDLPLPEDK 284
A+ K ++ + + + KF G + +NS LS LLD+Y +P+D+
Sbjct: 255 AISGKAKEYEDRIRNAGKFVFGENMDRNSSGLLLSDELLDQYSISNIPKDE 305
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -1
Query: 726 AKTLLAPTPQ*YGPLGRRASSCRPPKRSKVRVEEHVLLLYAEPRLVVSAAVV 571
A T LA + L ++ S+ P + ++ +L LYA PR VS++ +
Sbjct: 184 ATTSLAQSSPNLASLSKQPSTVHAPSTRQRDLKSSILSLYASPRPQVSSSSI 235
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 201 PVLKNSPNAFLSKTLLD 251
P +KN PN F+SK L+D
Sbjct: 451 PHIKNDPNYFVSKELID 467
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 194 IKFLDCLALCFEFPTFF*HRLITFYCL 114
++++ +L ++P FF H +T +CL
Sbjct: 265 LQWMAVFSLYAKYPAFFEHHFLTIFCL 291
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 780 IGTPAYRQHL*WASMRSLAKTLLAPTPQ*YGPLGRRASSCRP 655
+G+PAY A + +L K L YGPLG R + C P
Sbjct: 140 LGSPAYSAAK--AGLENLTKALAVR----YGPLGIRVNVCAP 175
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 140 ARKMSETQNKVQDNPKILSGSGAKELSKCIPLEDTVGPVQRSTAAGRQG 286
++K ETQ+ + +PK +GA++ + + ++ + V A G QG
Sbjct: 36 SKKNFETQSPDEPSPKTTDSTGARDANLSLKTQEPI--VSADDAKGAQG 82
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/72 (22%), Positives = 29/72 (40%)
Frame = +2
Query: 107 PIINNKR*LSGARKMSETQNKVQDNPKILSGSGAKELSKCIPLEDTVGPVQRSTAAGRQG 286
P+I+ S +SET V N + LS+ +PL+ +Q S +
Sbjct: 384 PLISQSETHSIFSALSETPTPVSGNGNVADAPPDFSLSQVMPLDLIAPSMQPSAVSSPMS 443
Query: 287 PRHIRMDRRLRR 322
H+++ + R
Sbjct: 444 ESHVQISSEMPR 455
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,434,904
Number of Sequences: 5004
Number of extensions: 70452
Number of successful extensions: 164
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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