Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_L16
(879 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943... 84 2e-16
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 83 4e-16
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 80 2e-15
03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642... 78 1e-14
11_01_0136 + 1135170-1135406,1135854-1136240 34 0.17
08_02_1178 + 24958623-24959894 29 4.9
01_03_0076 - 12241408-12241545,12241719-12241790,12242173-122422... 29 4.9
01_01_0779 - 6030245-6031780 28 8.6
>02_05_0661 -
30693701-30693853,30694037-30694196,30694290-30694381,
30694469-30694543,30694671-30694799,30694916-30695003,
30695118-30695224,30695645-30695693,30695802-30695905,
30696108-30696147,30696838-30696911
Length = 356
Score = 83.8 bits (198), Expect = 2e-16
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGP 835
P+GPYYCG+GA+K F RD++++HYK CLYAG+ I+G N E M QWE + GP
Sbjct: 153 PQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGP 204
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 451 PRPYTGXPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYD--RCRDHEPWFGIEQEYV 624
P+ PFR+GN++LVMCD Y + +P TN R + + EPW+GIEQEY
Sbjct: 74 PQAIFKDPFRKGNNILVMCDCYTPAGEPIPTNKRHNAAKIFSSPEVASEEPWYGIEQEYT 133
Query: 625 LLDSDLR-PFGWPTTGSPPAQG 687
LL D+ P GWP G P QG
Sbjct: 134 LLQKDINWPLGWPVGGFPGPQG 155
Score = 51.6 bits (118), Expect = 8e-07
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +3
Query: 279 DKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQA 458
+K++A Y+WI GSG +R K RTL+ P LP WNY L PQA
Sbjct: 17 EKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQA 76
Query: 459 IYRXP 473
I++ P
Sbjct: 77 IFKDP 81
>04_04_1445 - 33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 82.6 bits (195), Expect = 4e-16
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGPPLACQ 850
P+GPYYC VG++K F RD+ +AHYK CLYAG+ I+GTN E M QWE + GP + +
Sbjct: 952 PQGPYYCAVGSDKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIE 1008
Score = 77.4 bits (182), Expect = 1e-14
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +1
Query: 451 PRPYTGXPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYD--RCRDHEPWFGIEQEYV 624
P+ PFR GN++LVMCDTY + +P TN R + + + + PWFGIEQEY
Sbjct: 873 PQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVVSQVPWFGIEQEYT 932
Query: 625 LLDSDLR-PFGWPTTGSPPAQG 687
LL D+ P GWP G P QG
Sbjct: 933 LLQRDVNWPLGWPVGGYPGPQG 954
Score = 55.2 bits (127), Expect = 7e-08
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +3
Query: 279 DKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQA 458
DK++A Y+W+ G+G +R K RT++ E P +LP WNY L PQA
Sbjct: 816 DKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQA 875
Query: 459 IYRXP 473
I++ P
Sbjct: 876 IFKDP 880
>03_05_0899 -
28619081-28619208,28619309-28619369,28619936-28620095,
28620200-28620237,28620341-28620394,28620562-28620636,
28620744-28620872,28621172-28621259,28621340-28621446,
28621547-28621595,28621683-28621786,28622019-28622133,
28622517-28622596
Length = 395
Score = 80.2 bits (189), Expect = 2e-15
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGP 835
P+GPYYC GA+K + RD+++AHYK CL+AG+ I+G NAE M QWE + GP
Sbjct: 180 PQGPYYCAAGADKSYGRDIVDAHYKACLFAGINISGINAEVMPGQWEFQIGP 231
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 451 PRPYTGXPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDR--CRDHEPWFGIEQEYV 624
P+ PFR+G ++LVMCD Y + +P TN+R + + EPW+GIEQEY
Sbjct: 101 PQAIFRDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIFSHPDVKAEEPWYGIEQEYT 160
Query: 625 LLDSDLR-PFGWPTTGSPPAQG 687
LL + P GWP G P QG
Sbjct: 161 LLQKHINWPLGWPLGGYPGPQG 182
>03_02_0210 -
6425708-6425863,6425955-6426114,6426204-6426295,
6426490-6426564,6426701-6426829,6427312-6427375,
6427761-6427867,6428795-6428843,6428955-6429058,
6429166-6429205,6429492-6429565
Length = 349
Score = 77.8 bits (183), Expect = 1e-14
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +2
Query: 686 GPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGP 835
GPYYC GA K F RD+++AHYK C+YAG+ I+G N E M QWE + GP
Sbjct: 147 GPYYCAAGAEKAFGRDIVDAHYKACIYAGINISGINGEVMPGQWEFQVGP 196
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +1
Query: 451 PRPYTGXPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDR--CRDHEPWFGIEQEYV 624
P+ PFRRG+++LVMCD Y +P TN R + + PW+GIEQEY
Sbjct: 74 PQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVVAEVPWYGIEQEYT 133
Query: 625 LLDSDLR-PFGWP 660
LL D+ P GWP
Sbjct: 134 LLQKDVNWPLGWP 146
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +3
Query: 279 DKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQA 458
DK++A Y+W+ GSG +R K RT+ LP WNY L PQA
Sbjct: 17 DKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSSTGQAPGEDSEVILYPQA 76
Query: 459 IYRXP 473
I++ P
Sbjct: 77 IFKDP 81
>11_01_0136 + 1135170-1135406,1135854-1136240
Length = 207
Score = 33.9 bits (74), Expect = 0.17
Identities = 24/105 (22%), Positives = 44/105 (41%)
Frame = +2
Query: 140 ARKMSETQNKVQDNPKILSGSGAKELSKCIPLEDTVGPVQRSTAAGRQGPRHIRMDRRLR 319
AR+ T+ V+ I S + + +K IP+ + P + GR+ R + M L+
Sbjct: 66 AREELRTKGYVERWTSIASSARVHQFTKSIPIPNKATPSEEEELKGREEDRCVAMTNELK 125
Query: 320 RACSLQRQDFELHSRDS*RPADMELRRQLYRPDDKHELRHAPEAP 454
R CS + E + + + ++++ H L P AP
Sbjct: 126 R-CSKEATPSEEKAAKKMKKEEAVKKKRMPMERVHHLLSMVPRAP 169
>08_02_1178 + 24958623-24959894
Length = 423
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1
Query: 615 LLYAEPRLVVSAAVVRFLALNTVVCLCWLHA 523
L YA P V S A +RF V LC LHA
Sbjct: 98 LRYALPDRVFSPAAIRFYVAEIVSALCELHA 128
>01_03_0076 -
12241408-12241545,12241719-12241790,12242173-12242289,
12243307-12245127,12245361-12245810
Length = 865
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 742 FNEIPREDL-VSSNAAIIWSPGQEGFQL*ATQTV*GQSRGARTPALCRTTARGL 584
F E+P DL + SNAA++ G + F + + + A A CRT A L
Sbjct: 729 FEELPAYDLAMQSNAAVVLDHGTDIFIWLGAELAAQEGQSAAALAACRTLAEEL 782
>01_01_0779 - 6030245-6031780
Length = 511
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 131 LSGARKMSETQNKVQDNPKILSGSGAKELSKCIPLEDTVGPVQRSTAAGRQGPRH 295
L+GAR M + + + + + G G E +++TV + +TAAG P H
Sbjct: 248 LAGARLMHTLGDCARQSRQRMLGGGEPECLLDYLMQETVREIDEATAAGLPPPPH 302
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,802,682
Number of Sequences: 37544
Number of extensions: 524800
Number of successful extensions: 1386
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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