Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_L16
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 100 3e-21
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 100 3e-21
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 95 8e-20
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 81 1e-15
AL023830-1|CAA19472.1| 449|Caenorhabditis elegans Hypothetical ... 32 0.62
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 31 1.1
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 99.5 bits (237), Expect = 3e-21
Identities = 40/72 (55%), Positives = 50/72 (69%)
Frame = +1
Query: 472 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 651
PFR+G + LVMC+TYD +PT TN+R +C+E ++ D PWFG+EQEY LLD D PF
Sbjct: 90 PFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPF 149
Query: 652 GWPTTGSPPAQG 687
GWP G P QG
Sbjct: 150 GWPKNGFPGPQG 161
Score = 93.1 bits (221), Expect = 2e-19
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGP 835
P+GPYYCGVGANKV+ RD++EAHY+ CLYAG+ I+GTNAE M QWE + GP
Sbjct: 159 PQGPYYCGVGANKVYGRDIVEAHYRACLYAGIQISGTNAEVMPGQWEFQVGP 210
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +3
Query: 291 ATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRX 470
A Y+WIDGSGE++R K RT ++ P P+ LPIWN+ +LKP AIY
Sbjct: 30 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAIYPD 89
Query: 471 P 473
P
Sbjct: 90 P 90
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 99.5 bits (237), Expect = 3e-21
Identities = 40/72 (55%), Positives = 50/72 (69%)
Frame = +1
Query: 472 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 651
PFR+G + LVMC+TYD +PT TN+R +C+E ++ D PWFG+EQEY LLD D PF
Sbjct: 93 PFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPF 152
Query: 652 GWPTTGSPPAQG 687
GWP G P QG
Sbjct: 153 GWPKNGFPGPQG 164
Score = 93.1 bits (221), Expect = 2e-19
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGP 835
P+GPYYCGVGANKV+ RD++EAHY+ CLYAG+ I+GTNAE M QWE + GP
Sbjct: 162 PQGPYYCGVGANKVYGRDIVEAHYRACLYAGIQISGTNAEVMPGQWEFQVGP 213
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +3
Query: 291 ATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRX 470
A Y+WIDGSGE++R K RT ++ P P+ LPIWN+ +LKP AIY
Sbjct: 33 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAIYPD 92
Query: 471 P 473
P
Sbjct: 93 P 93
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 94.7 bits (225), Expect = 8e-20
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = +1
Query: 472 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 651
PF G +VLVMCDT D+ M+PT TNHR C E + D +PWFG+EQEY+++D D P
Sbjct: 92 PFLGGLNVLVMCDTLDHEMKPTATNHRQMCAELMKKVSDQQPWFGMEQEYLIVDRDEHPL 151
Query: 652 GWPTTGSPPAQG 687
GWP G P QG
Sbjct: 152 GWPKHGYPAPQG 163
Score = 73.3 bits (172), Expect = 2e-13
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGPPLACQL 853
P+G YYCG+GA++ F R+++E HY+ CL+AG+ I G+NAE QWE + G L ++
Sbjct: 161 PQGKYYCGIGADRAFGREVVETHYRACLHAGITIFGSNAEVTPGQWEFQIGTCLGIEM 218
Score = 69.7 bits (163), Expect = 3e-12
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +3
Query: 231 LSKTLLDRYRDLPLPEDKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXX 410
L + +D + LP K ATYVWIDG+GEH+R K RT+N P+ + PIWNY
Sbjct: 12 LGQATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSST 71
Query: 411 XXXXXXXXXXHLKPQAIYRXP 473
+L+P A++ P
Sbjct: 72 GQADGLNSDRYLRPVAVFPDP 92
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 93.5 bits (222), Expect = 2e-19
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = +1
Query: 472 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 651
PF +G++VLVMC+T D +M+PT TNHR C + +H PWFG+EQEY+++D D P
Sbjct: 92 PFLQGHNVLVMCETLDETMKPTATNHRQNCAAIMKKVAEHHPWFGMEQEYLIVDRDEHPL 151
Query: 652 GWPTTGSPPAQG 687
GWP G P QG
Sbjct: 152 GWPKHGYPAPQG 163
Score = 73.7 bits (173), Expect = 2e-13
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSG 832
P+G YYCGVGA++ F R+++E HY+ CL+AG+ I GTNAE QWE + G
Sbjct: 161 PQGKYYCGVGADRAFGREVVETHYRACLHAGINIFGTNAEVTPGQWEFQIG 211
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/81 (37%), Positives = 41/81 (50%)
Frame = +3
Query: 231 LSKTLLDRYRDLPLPEDKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXX 410
L + +D + LP K ATYVWIDG+GE +R K RT N P+ + PIWNY
Sbjct: 12 LGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSST 71
Query: 411 XXXXXXXXXXHLKPQAIYRXP 473
+L+P A++ P
Sbjct: 72 GQAEGLNSDRYLRPVAVFPDP 92
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/72 (54%), Positives = 46/72 (63%)
Frame = +1
Query: 472 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 651
PF G + LVMCDT D+ MQPT T+HR C E RD PWFG+EQEY+++D D P
Sbjct: 92 PFLGGGNKLVMCDTLDHQMQPTATSHRQACAEIMHEIRDTRPWFGMEQEYLIVDRDEHPL 151
Query: 652 GWPTTGSPPAQG 687
GWP G P QG
Sbjct: 152 GWPKHGFPDPQG 163
Score = 70.5 bits (165), Expect = 1e-12
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSG 832
P+G YYC VGA++ F R+++E HY+ CL+AG+ I GTNAE QWE + G
Sbjct: 161 PQGKYYCSVGADRAFGREVVETHYRACLHAGLNIFGTNAEVTPGQWEFQIG 211
Score = 64.9 bits (151), Expect = 7e-11
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = +3
Query: 231 LSKTLLDRYRDLPLPEDKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXX 410
L ++D++ L K+ ATYVWIDG+GE++R K RT + +P+ +D PIWNY
Sbjct: 12 LGTAVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSST 71
Query: 411 XXXXXXXXXXHLKPQAIYRXP 473
+L+P A Y P
Sbjct: 72 GQAKGRDSDRYLRPVAAYPDP 92
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 80.6 bits (190), Expect = 1e-15
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = +2
Query: 680 PRGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEXKSGP 835
P+GPYYCGVG+++VF R ++EAHY+ C+YAG+ I+G+N E+M SQ+E + GP
Sbjct: 162 PQGPYYCGVGSDRVFGRHILEAHYRACMYAGIKISGSNVESMPSQFEYQVGP 213
Score = 79.0 bits (186), Expect = 4e-15
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +1
Query: 472 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 651
PFR G + + +C+T + +P TN R +C + ++ +D EPWFG+EQE+ LL +D P+
Sbjct: 93 PFRPGPNKIALCETLTHDNKPHPTNTRQQCVDNMEKAKDQEPWFGMEQEFTLLGADKHPY 152
Query: 652 GWPTTGSPPAQG 687
WP G P QG
Sbjct: 153 NWPVNGFPAPQG 164
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 YVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRXPV 476
Y+WID + E++R K +T ++ P+TP DLPIWN+ +++P A+YR P
Sbjct: 35 YIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYIRPIALYRDPF 94
Query: 477 -PA-RKPRACH-VRHIRLQHATN 536
P K C + H H TN
Sbjct: 95 RPGPNKIALCETLTHDNKPHPTN 117
>AL023830-1|CAA19472.1| 449|Caenorhabditis elegans Hypothetical
protein Y26E6A.1 protein.
Length = 449
Score = 31.9 bits (69), Expect = 0.62
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 323 ACSLQRQDFELHSRDS*RPADMELRRQLYRPDDKHELRHAPEAPGHIQGTRSGAETTCLS 502
AC + + D E H S + LR+QLY+ ++ EL + EA + + C++
Sbjct: 204 ACKIMK-DMEYHHFLS---STYSLRQQLYKLRERLELEYF-EARVNPERLEHMECAGCIT 258
Query: 503 CATHTITAC--NQQRQTTVLSAKK 568
CA H + AC N QR + A K
Sbjct: 259 CAEHLLGACMPNMQRDVYQIHANK 282
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 144 EKCRKLKTKCKTIQKFYXGPVLKNSPNAFLSKTLLDRY 257
EKC LK+KC I F+ G S F + +LDRY
Sbjct: 106 EKC--LKSKCSVIVYFHGGAYNTESATMFSDRFILDRY 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,613,980
Number of Sequences: 27780
Number of extensions: 422849
Number of successful extensions: 1055
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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