Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_L09
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.055
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.17
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.51
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.51
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.90
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 6.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.3
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect(2) = 0.055
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 673 PKXGPPPXXXPXXXXPPPPXPPP 741
P P P PPPP PPP
Sbjct: 174 PSAAAPATSLPSDYNPPPPPPPP 196
Score = 23.8 bits (49), Expect(2) = 0.055
Identities = 13/55 (23%), Positives = 14/55 (25%)
Frame = +1
Query: 718 PPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPPXSPPXXXTPTXXXXP 882
PPPP PPP + P PP P P P
Sbjct: 190 PPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 673 PKXGPPPXXXPXXXXPPPPXPPPRXXXXKXKXPKXGG 783
P PPP PPPP PP K K P G
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSG 45
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 664 AKXPKXGPPPXXXPXXXXPP--PPXPPPRXXXXKXK 765
A P PPP P PP PP PPP K K
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.51
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 703 PXXXXPPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPPXSPP 849
P PP PPPR + P NPP PP P S P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSS-SRAVSNPPAPPPAIPGRSAP 401
Score = 29.5 bits (63), Expect = 0.68
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 7/62 (11%)
Frame = +1
Query: 685 PPPXXXPXXXXPPPPXPPPRXXXXKXKXPKXGGKX-------PXXXXNPPXXPPXXPPXS 843
PPP PP PP P G P PP PP PP +
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 844 PP 849
PP
Sbjct: 436 PP 437
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Frame = +1
Query: 688 PPXXXPXXXXP-PPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPPXSPP 849
PP P P PPP PPP NP PP PP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 718 PPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPP 825
PPPP PP R K P G PP PP
Sbjct: 311 PPPPPPPSRRNRGK---PPIGNGSSNSSLPPPPPPP 343
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/66 (25%), Positives = 18/66 (27%), Gaps = 2/66 (3%)
Frame = +1
Query: 673 PKXGPPPXXXPXXXXPPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXP--PXXPPXSP 846
P PP P PP PP P P P P P PP +P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 847 PXXXTP 864
P
Sbjct: 475 APPPAP 480
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +1
Query: 688 PPXXXPXXXXPPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPPXSP 846
PP P P PP + P PP PP PP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 718 PPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPPXSPP 849
PPPP PP P G P PP P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP--PPRSAPSTGRQPPP 378
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 11/66 (16%)
Frame = +1
Query: 685 PPPXXXPXXXXPP-----------PPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPPXX 831
PPP P P PP PPP G P PP
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL 423
Query: 832 PPXSPP 849
PP +PP
Sbjct: 424 PPSAPP 429
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.51
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 673 PKXGPPPXXXPXXXXPPPPXPPP 741
P PPP PPPP PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 667 KXPKXGPPPXXXPXXXXPPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPPXSP 846
K P PP P P P PPP P GG P PP PP P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPP--------APIMGGPPPPPP--PPGVAGAGPPPPP 779
Query: 847 P 849
P
Sbjct: 780 P 780
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.90
Identities = 18/72 (25%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Frame = +1
Query: 682 GPPPXXXPXXXXPPPPXPP-----PRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPPXSP 846
G PP P PP P P P+ P P PP PP
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 847 PXXXTPTXXXXP 882
P P+ P
Sbjct: 1198 PPVPKPSVGVPP 1209
Score = 29.1 bits (62), Expect = 0.90
Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +1
Query: 682 GPPPXXXPXXXXPPPPXP----PPRXXXXKXKXP-KXGGKXPXXXXNPPXXPPXXPPXSP 846
G PP P PP P P PP P + P PP PP +
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 847 PXXXTPTXXXXP 882
P TP+ P
Sbjct: 1217 PPVPTPSAGLPP 1228
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/67 (26%), Positives = 18/67 (26%), Gaps = 3/67 (4%)
Frame = +1
Query: 673 PKXGPP-PXXXPXXXXPPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPP--XXPPXS 843
P PP P PPP P P P P PP P PP
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 844 PPXXXTP 864
P P
Sbjct: 1106 KPSVAVP 1112
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/48 (29%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = +2
Query: 722 PPXXPP-PEXXXKXKXXPXXGGXPXXXPXTXRXPPXXXPXXPPPXXKP 862
P PP P+ P G P + PP P PP KP
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/64 (25%), Positives = 19/64 (29%), Gaps = 5/64 (7%)
Frame = +1
Query: 673 PKXGPPPXXXPXXXXPPPPXPP-----PRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPP 837
P PP P PP P P P+ P G P + P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Query: 838 XSPP 849
+PP
Sbjct: 1157 GAPP 1160
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/43 (27%), Positives = 14/43 (32%)
Frame = +2
Query: 734 PPPEXXXKXKXXPXXGGXPXXXPXTXRXPPXXXPXXPPPXXKP 862
P P+ P G P + PP P PP KP
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = +1
Query: 673 PKXGPPPXXXPXXXXPPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPP--XXPPXSP 846
P G PP P P P PPP K P PP P PP
Sbjct: 1174 PSSGIPPVPKPAAGVP--PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 847 PXXXTP 864
P P
Sbjct: 1232 PTAKAP 1237
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +1
Query: 685 PPPXXXPXXXXPPPPXPPPRXXXXKXKXPKXGGK 786
PPP P PP PPP P G +
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 664 AKXPKXGPPPXXXPXXXXPPPPXPPP 741
A P+ P P PPPP PP
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 673 PKXGPPPXXXPXXXXPPPPXPPP 741
P PPP P PP PPP
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -2
Query: 770 GXFXFXXXFRG-GGXGGGGXXXXGXXXGGGPXXGXLAXF 657
G F F G GG GGG G G P G +A F
Sbjct: 454 GGFGGRGGFGGRGGFGGGRGRGRGGARSGNPNRGSVAPF 492
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 685 PPPXXXPXXXXPPPPXPPPRXXXXKXKXPKXGGKXPXXXXNPPXXPPXXPPXSPP 849
P P PP P PP P P PP P P SPP
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSL--PPPAQPAAPVKSPP 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,265,193
Number of Sequences: 5004
Number of extensions: 13365
Number of successful extensions: 152
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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