Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_L05
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53153-2|AAQ91899.1|  422|Caenorhabditis elegans Hypothetical pr...    32   0.48 
U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    32   0.48 
Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    29   4.5  
CU457740-4|CAM36334.1|  735|Caenorhabditis elegans Hypothetical ...    29   6.0  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    28   7.9  
AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U53153-2|AAQ91899.1|  422|Caenorhabditis elegans Hypothetical
           protein T19A5.3b protein.
          Length = 422

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 544 TAVLPPRTTRIHNPPTTPI-RPNNSTLTAMVSLE 642
           T  LPP TT I+ PPTT   RP  +T T    +E
Sbjct: 216 TTTLPPETTTIYVPPTTASRRPTTTTTTTEAPVE 249


>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical
           protein T19A5.3a protein.
          Length = 715

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 544 TAVLPPRTTRIHNPPTTPI-RPNNSTLTAMVSLE 642
           T  LPP TT I+ PPTT   RP  +T T    +E
Sbjct: 284 TTTLPPETTTIYVPPTTASRRPTTTTTTTEAPVE 317


>Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical
           protein Y49E10.10 protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +1

Query: 448 TQQVVQEVTKMMVTAAEWAGRVTPVTEQQSPHTA-VLPPRTTRIHNPPTTPIRPNNST 618
           T  V  E T    TAAE      P TE   P T    PP TT+   PPTT   P  +T
Sbjct: 153 TAPVTPEPTVKNTTAAE------PTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTT 204


>Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical
           protein B0035.1b protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 303 PYEPPTADIYTQQSYSAPSSYQDGGY 380
           P  PP  + +  Q Y AP  Y  GGY
Sbjct: 227 PRTPPYENEHEHQDYQAPDDYNQGGY 252


>Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical
           protein B0035.1a protein.
          Length = 298

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 303 PYEPPTADIYTQQSYSAPSSYQDGGY 380
           P  PP  + +  Q Y AP  Y  GGY
Sbjct: 227 PRTPPYENEHEHQDYQAPDDYNQGGY 252


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 262 LNQMDMYHHTLDISHMSHQLLIFIHN 339
           L Q+   HHT +IS+++ ++L+F H+
Sbjct: 906 LRQIGNLHHTEEISNLAREILLFYHS 931


>CU457740-4|CAM36334.1|  735|Caenorhabditis elegans Hypothetical
           protein C50E10.4 protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +1

Query: 445 DTQQVVQEVTKMMVTAAEWAGRVTPVTEQQSPHTAVLPPRTTRIHNPPTTP 597
           +T  V+Q+  +++ TAA  AGR  P   QQ PH   +PP+  R    P  P
Sbjct: 528 ETPPVLQQ-EQVISTAAPTAGR-HPNIIQQVPHINRIPPQPLRRLTAPQAP 576


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 288 HTGYQPYEPPTADIYTQQSY 347
           H  Y P+ PP++D YT   Y
Sbjct: 241 HVAYMPHPPPSSDCYTYDYY 260


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 288 HTGYQPYEPPTADIYTQQSY 347
           H  Y P+ PP++D YT   Y
Sbjct: 241 HVAYMPHPPPSSDCYTYDYY 260


>U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical
           protein C12D12.1b protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 288 HTGYQPYEPPTADIYTQQSY 347
           H  Y P+ PP++D YT   Y
Sbjct: 241 HVAYMPHPPPSSDCYTYDYY 260


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 573  YSQPAYNSYPPQQQYSNSYG 632
            Y Q  Y   PPQ QY+  YG
Sbjct: 2034 YQQQMYQQQPPQPQYAQQYG 2053


>AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical
           protein C51G7.3 protein.
          Length = 754

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 573 YSQPAYNSYPPQQQYSNSYG 632
           Y Q  Y   PPQ QY+  YG
Sbjct: 659 YQQQMYQQQPPQPQYAQQYG 678


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,686
Number of Sequences: 27780
Number of extensions: 291007
Number of successful extensions: 1171
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)