Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_L01
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           32   0.72 
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    30   2.9  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   3.9  
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988...    29   5.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.7  

>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 31.9 bits (69), Expect = 0.72
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = +1

Query: 157 YEPIDNRPYIVNPPKDYNPXGNGYEPI---DNGAYYVDRPQGRPYFKPTPFXGARG 315
           Y P  + P  V PP  Y P  +G  P     N + Y + P GRP   P P  GA G
Sbjct: 394 YAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAGG 448


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +1

Query: 145 QGNGYEPIDNRPYIVNPPKDYNPXGNGYEPIDNGAYYVDRPQGRPYFKPTPF 300
           QG  Y+P   R     PP+   P    Y P   G  Y  +PQG+PY  P P+
Sbjct: 246 QGETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/56 (26%), Positives = 15/56 (26%)
 Frame = +1

Query: 721  PXPPPXPXXXXXXXXXXXXXXXPXXPXTRXXXPPXXXPXXPXXXAXXPXTPXPXXP 888
            P PPP P               P  P      PP   P  P      P  P P  P
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGP 1192


>05_05_0156 + 22792783-22793410,22797153-22797227,22797644-22798879,
            22798947-22799155,22799240-22800209,22800395-22800465
          Length = 1062

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 198  GRINDVRAVVNRFVAVSLSVGHSQQSEDENHEEFHFYMITSYHRRK 61
            G ++D     ++F+ +S       QS+DEN +  H  +  +YH +K
Sbjct: 994  GEVHDHSPFDDKFLPLSFDAQIDSQSDDENDKSGHGRIKGNYHSKK 1039


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/62 (25%), Positives = 16/62 (25%)
 Frame = +1

Query: 721 PXPPPXPXXXXXXXXXXXXXXXPXXPXTRXXXPPXXXPXXPXXXAXXPXTPXPXXPXRXX 900
           P PPP P               P  P      PP      P      P  P P  P    
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374

Query: 901 GG 906
           GG
Sbjct: 375 GG 376


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,020,650
Number of Sequences: 37544
Number of extensions: 256330
Number of successful extensions: 532
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)