Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_L01
         (910 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    32   3.3  
AF007192-1|AAC02270.1|  338|Homo sapiens intestinal mucin protein.     31   7.6  

>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 152 TATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVP---KADLTSSLP 295
           T    +TT RTS  +P TTT+  T    + ++  T TVP       T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186



 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +2

Query: 140 TLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTSSLPL 298
           T+  T T   TT  T++ +P TTT+  T T +STT  +  T      T+S+P+
Sbjct: 149 TVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTTTSVPV 199


>AF007192-1|AAC02270.1|  338|Homo sapiens intestinal mucin protein.
          Length = 338

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 134 WPTLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTSSLP 295
           WPT   T ++L T   +S  +P T       TN++    +  T+P   +T S P
Sbjct: 179 WPTATNTLSSLTTNILSSTPVPSTERTTSHTTNINPVSTLVTTLP-TTITRSTP 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,275,128
Number of Sequences: 237096
Number of extensions: 1355641
Number of successful extensions: 9492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9447
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)