Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_L01
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 36 0.030
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.070
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.070
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 4.6
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 6.1
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 36.3 bits (80), Expect = 0.030
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 122 LCWLWPTLKETATNLLTTARTSLILPKTTT---LXETATNLSTTVHITWTVPKADLTSSL 292
LC+LW L T T TT T+ + TTT + T T T T TVP T+++
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTV 238
Query: 293 P 295
P
Sbjct: 239 P 239
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 35.1 bits (77), Expect = 0.070
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 134 WPTLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTSSL 292
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 35.1 bits (77), Expect = 0.070
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 134 WPTLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTSSL 292
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +2
Query: 137 PTLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTS 286
PT + T T TT T+ P TTT ET T +TT T T P T+
Sbjct: 112 PTTETTTTPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTPTTTTTT 160
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 137 PTLKETA-TNLLTTARTSLILPKTTT-LXETATNLSTTVHITWTVPKADLTS 286
PT TA T TT T+ P TTT + T T TT T T P T+
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTT 240
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 140 TLKETATNLLTTARTSLILPKTTTLX-ETATNLSTTVHITWTVPKADLTSS 289
T T T TT T+ P TTT T T TT T T P + T++
Sbjct: 69 TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 140 TLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTS 286
T T T TT T+ P TTT T TT T T P T+
Sbjct: 83 TTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 140 TLKETATNLLTTARTSLILPKTTTLX-ETATNLSTTVHITWTVPKADLT 283
T T T TT T+ +P TTT T T +TT T T P T
Sbjct: 198 TTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTT 246
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 140 TLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVP 268
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 152 TATNLLTTARTSLILPKTTTLXETATNLSTTVHIT--WTVPKADLTSSLP 295
T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 304 TETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 152 TATNLLTTARTSLILPKTTTLXETATNL-STTV-HITWTVPKADLTSSLPLFXVLAV 316
T T TT T+ P TTT T T STT T T P T+S F +
Sbjct: 279 TTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTI 335
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 152 TATNLLTTARTSLILPKTTTLX-ETATNLSTTVHITWTVPKADLTSS 289
T T TT TS P TTT T T STT T T+ T++
Sbjct: 297 TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 137 PTLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTS 286
P+ T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 137 PTLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTS 286
P+ T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 140 TLKETATNLLTTARTSLILPKTTTLXETATNLSTTVHITWTVPKADLTSSLPLFXVLAV 316
T T T TT T+ P TTT T T + + +T V + T+ P F +
Sbjct: 104 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLT-EVFRTSTTTEAPFFTTTTI 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,354,918
Number of Sequences: 27780
Number of extensions: 195509
Number of successful extensions: 532
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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