Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_K21
(867 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.007
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 33 0.070
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.65
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 29 0.86
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 28 1.5
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 28 2.0
SPAC3A11.04 |||siepin homolog|Schizosaccharomyces pombe|chr 1|||... 27 4.6
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 26 6.0
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 26 6.0
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 26 8.0
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 26 8.0
SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces pom... 26 8.0
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 26 8.0
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 35.9 bits (79), Expect = 0.007
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +3
Query: 438 TKGTITPSI*STNKTTTK--LHSVTPKTKPARKSPGSLPPCW-KTTEFTSRSCPPRTNST 608
T T TP + +TN TT+ L++ TP T P S S W TT T S T+ST
Sbjct: 579 TPVTSTP-VTTTNCTTSTSVLYTSTPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSST 637
Query: 609 *SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPSMYESDVMFF 734
+T T ++ + T S++T T S S F+
Sbjct: 638 SIPLTSTNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFY 679
Score = 35.5 bits (78), Expect = 0.010
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = +3
Query: 450 ITPSI*STNKTTTKLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRK 629
ITP++ T+ ++T + + P + + + S P T+ TS S PP NST + +T
Sbjct: 247 ITPTVPPTSTSSTSI-PIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNST-TPVTPT 304
Query: 630 VLVMTVSSTVIAPLTPSNTTGT 695
V + SST P P++T+ T
Sbjct: 305 VPPTSTSSTSTPP-PPASTSST 325
Score = 35.5 bits (78), Expect = 0.010
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 438 TKGTITPSI*STNKTTTKLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SS 617
T T + SI T +TT VTP P S S PP +T T S P +++ S
Sbjct: 283 TSCTTSTSIPPTGNSTTP---VTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSC 339
Query: 618 ITRKVLVMTVSSTV-IAPLTPSNTTGTLS 701
T + T +ST + P P +T + S
Sbjct: 340 TTSTSIPPTGNSTTPVTPTVPPTSTSSTS 368
Score = 34.3 bits (75), Expect = 0.023
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +3
Query: 438 TKGTITPSI*STNKTTTKLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SS 617
T T + SI T +TT VTP P S S PP +T T S P +++ S
Sbjct: 337 TSCTTSTSIPPTGNSTTP---VTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSC 393
Query: 618 ITRKVLVMTVSSTV-IAPLTPSNTTGT 695
T + T +ST + P P ++ T
Sbjct: 394 TTSTSIPPTGNSTTPVTPTVPPTSSST 420
Score = 33.1 bits (72), Expect = 0.053
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 438 TKGTITPSI*STNKTTTKLHSVTPKTKPARKSPGSLP-PCWKTTEFTSRSCPPRTNST*S 614
T T + SI T +++ +TP P S S+P P T+ + S P T ST S
Sbjct: 170 TSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTST-S 228
Query: 615 SITRKVLVMTVSSTVIAPLTPS-NTTGTLSPSM 710
T + SS++ P+TP+ T T S S+
Sbjct: 229 CTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSI 261
Score = 32.7 bits (71), Expect = 0.070
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 438 TKGTITPSI*STNKTTTKLHSVTPKTKPARKSPGSLP-PCWKTTEFTSRSCPPRTNST*S 614
T T + SI T +++ +TP P S S+P P T+ + S P T ST
Sbjct: 113 TSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSC 172
Query: 615 SITRKVLVMTVSSTVIAPLTPS-NTTGTLSPSM 710
+ + + SS++ P+TP+ T T S S+
Sbjct: 173 TTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSI 205
Score = 31.5 bits (68), Expect = 0.16
Identities = 23/91 (25%), Positives = 42/91 (46%)
Frame = +3
Query: 438 TKGTITPSI*STNKTTTKLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SS 617
T T TP ++ +T S P T + + S+PP +T + + PP + S+ +S
Sbjct: 310 TSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSS-TS 368
Query: 618 ITRKVLVMTVSSTVIAPLTPSNTTGTLSPSM 710
+ + T +PL ++T+ T S S+
Sbjct: 369 TPPPPASTSSTGTSSSPLLSTSTSCTTSTSI 399
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 468 STNKTTTKLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTV 647
ST+ T T S P T + + S+PP +T + + PP + S+ +S +
Sbjct: 267 STSSTDTN-SSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSS-TSTPPPPASTSS 324
Query: 648 SSTVIAPLTPSNTTGTLSPSM 710
+ T +PL ++T+ T S S+
Sbjct: 325 TGTSSSPLPSTSTSCTTSTSI 345
Score = 26.2 bits (55), Expect = 6.0
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +3
Query: 450 ITPSI*STNK--TTTKLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCP--PRTNST*SS 617
IT S ST+ TT S P T + + S+PP ++ ++ P P T+++ +S
Sbjct: 88 ITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTS 147
Query: 618 ITRKVLVMTVSSTVIAPLTPSNTTGTLSPSM 710
I + + T PL ++T+ T S S+
Sbjct: 148 IPIPPTSTSSTDTNSNPLPTTSTSCTTSTSI 178
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 32.7 bits (71), Expect = 0.070
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Frame = +3
Query: 447 TITPSI*STNKTT-----TKLHSVTPKTKPARKSPGSLPPCWKTTEF--TSRSCPPRT-- 599
T T S+ STN T+ + H+ T T P S + TT T+ + PP T
Sbjct: 56 TSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHV 115
Query: 600 NST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPSMYESDVMF 731
NST + + V T +TV+ P T NTT + P+ + + F
Sbjct: 116 NSTTTVVPPTTHVNT--TTVVPPTTHVNTTTVVPPTTHANTTSF 157
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.5 bits (63), Expect = 0.65
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 583 DLEVNSVVFQHGGKLPGDFLAGFVFGVTECNFVV 482
DLE N +V Q+ G G+FL G FG + FV+
Sbjct: 411 DLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVL 444
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 29.1 bits (62), Expect = 0.86
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 227 ETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 370
ET K S K +K + + +++++ K NT++ A Q W+K KE
Sbjct: 128 ETPKKKHSLIRKRRKSPLDSSSAQKVLKKNKLNTLEQAQQNWSKYIKE 175
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 438 TKGTITPSI*STNKTTTKLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNS 605
T+ T +PS+ NKT TK H +K + L + FTS+ P T +
Sbjct: 727 TRETTSPSV--QNKTPTKYHRELKSSKDGHEQASPLVSSSPSGSFTSQISPAATTT 780
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 194 QLYMSVVIGEY-ETAIAKCSEYLKEKKGEVIKEAVKRLIE 310
Q+++++V+ Y A+ EYL+EK I + K ++E
Sbjct: 556 QIFINIVLPNYIRAALVVAKEYLREKANADINDLTKDMLE 595
>SPAC3A11.04 |||siepin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 807 RLHGLRWRPYLHQVS 763
+LHG+RW Y H+VS
Sbjct: 187 KLHGMRWFMYTHKVS 201
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 685 VFEGVSGAITVDDTVIT 635
V G+ GAIT+DD++IT
Sbjct: 117 VAAGIEGAITLDDSIIT 133
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 481 VLLVDQIEGVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 365
V+L+ I G + + L LL +D +++ +V FDDF+
Sbjct: 1284 VVLLQDIHGCLTAWA-RLTGLLVDDCNEVISDVHFDDFI 1321
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.8 bits (54), Expect = 8.0
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = -1
Query: 288 SLITSPFFSFRYSEHLAIAVSYSP------MTTLIYSCSASTSSVLGASVALEASAHTAR 127
+LI SP S S ++ V S M L+Y+ S + +S+ A + L+ + T
Sbjct: 284 ALIYSPDLSMDSSNYVQSVVQTSSSILNYSMKKLLYNASFAITSLFNALLILDPKSSTFI 343
Query: 126 TKANKVSLILAQWLSFESKS 67
+ N VSLI L KS
Sbjct: 344 FQENVVSLISGFLLKEYEKS 363
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = +2
Query: 413 TEQTVKLINKRDHHALNLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMST 592
+ T K +N+++H+ L+L ++ FG S D +S ++ + +N YF ++ +
Sbjct: 146 SSDTNKKVNRKEHNELSLSHLSFNDTSDFG-SSDLSSSEIE---STENDNKAPYFSLLYS 201
Query: 593 EDKQYLK 613
+ ++K
Sbjct: 202 DGFDFIK 208
>SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 347
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 757 VL*HLMKIWPPTKTVKPGASGEFGT 831
VL MK+ P TK V GASG GT
Sbjct: 156 VLVRQMKVKPGTKLVIEGASGGVGT 180
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = -1
Query: 330 MVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVAL 151
M F ++ T + +PF R+ HL S +T+ +Y+ + T ++++
Sbjct: 1 MRFFETLALALLTTGALAAPF---RHPHHLLNKRDVSVVTSKVYAYTTVTLEAAASAIST 57
Query: 150 EASAHTARTKA 118
+A A T A
Sbjct: 58 NGAAKEAATAA 68
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,480,519
Number of Sequences: 5004
Number of extensions: 72551
Number of successful extensions: 303
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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