Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_K21
(867 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0616 + 4467439-4467733,4469232-4469294,4469840-4471176,447... 30 2.8
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649 29 3.6
04_03_0694 + 18781776-18781994,18782475-18782648,18782743-187830... 29 4.8
03_01_0273 - 2107778-2108772,2108857-2109043,2109121-2110575,211... 29 4.8
03_01_0259 - 1996427-1998772 29 4.8
09_06_0010 - 20193577-20193921,20194014-20194160,20194239-201944... 29 6.4
05_03_0469 + 14439472-14440905 29 6.4
11_04_0358 + 16725417-16725422,16725789-16725858,16727825-167286... 28 8.4
05_03_0618 - 16262826-16263097,16263111-16263183 28 8.4
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 28 8.4
03_02_0950 + 12661008-12662312,12662403-12662576 28 8.4
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 8.4
01_03_0271 + 14454681-14456949,14457222-14457476,14458800-144588... 28 8.4
>06_01_0616 +
4467439-4467733,4469232-4469294,4469840-4471176,
4472719-4473086,4473526-4473559,4473978-4474421
Length = 846
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 630 VLVMTVSSTVIAPLTPSNTTGTLSPSMYESDVMFFVYNRXYNSVMTLDEDMAANEDR 800
VL++T S T A LT T G L P++ E +V + + V + +DM NEDR
Sbjct: 584 VLIITTSYT--ANLTSMLTVGQLQPTINELKKGDYVGYQQGSFVQNILKDMGFNEDR 638
>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
Length = 461
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 475 LVDQIEGVMVPFVYELDSLLGEDHSKLDG 389
+V GVM P + +L LLGE+++KL G
Sbjct: 7 IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35
>04_03_0694 +
18781776-18781994,18782475-18782648,18782743-18783057,
18783791-18785569,18786334-18786651,18787052-18787105
Length = 952
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 194 QLYMSVVI---GEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 364
+LY+ +++ G Y+ A+ S + G +KE K L+E+ T++ +L T G
Sbjct: 491 ELYLKILLEDLGRYDEALQYISSLEANQAGLTVKEYGKILVEHRPAETVEILLRLCTDGG 550
Query: 365 KEIVK 379
+ +
Sbjct: 551 DPMTR 555
>03_01_0273 -
2107778-2108772,2108857-2109043,2109121-2110575,
2110670-2111251
Length = 1072
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Frame = -3
Query: 343 VGEVHGVPLAVFDQTLHGFLDNLSLLFLQIFRAFGDSG-----------LVFTNDDTHIQ 197
V E G+P+AV D + D + +FL+ G L N D+ I
Sbjct: 705 VDEFFGIPVAVRDDLVQDLADGMEAIFLEYISFLTSCGSKQSYLPSLPPLTRCNQDSKII 764
Query: 196 LLRQYVISSWCKCGVRSQRTHGEDEGK 116
L + + C+ V S R HG +G+
Sbjct: 765 RLWKKAATP-CRAPVSSPRAHGHHQGQ 790
>03_01_0259 - 1996427-1998772
Length = 781
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 407 IFTEQTVKLINKRDHHALNLIDQQNHNKIAFGDSK 511
I ++ V++ N HHAL LI + + +I GDSK
Sbjct: 732 ILVKKNVRICN-HCHHALKLISRYSGRRIVVGDSK 765
>09_06_0010 -
20193577-20193921,20194014-20194160,20194239-20194495,
20194619-20194826
Length = 318
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = +3
Query: 507 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNT 686
P R+ P TT+ + PP T S S + T SSTV + + T
Sbjct: 244 PPVSQRRQFQAPPPAAPTTTKTAAAPAPPPTASWESFDLLSSMPSTSSSTVTTTMAAATT 303
Query: 687 TGTLSP 704
T T SP
Sbjct: 304 TTTTSP 309
>05_03_0469 + 14439472-14440905
Length = 477
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 501 VTPKTKPARKSPGS--LPPCWKTTEFTSRSCPP 593
+T T+ AR PG+ +PP W+ T+RS PP
Sbjct: 187 LTAVTEFARGVPGAPTVPPVWEREALTTRSWPP 219
>11_04_0358 +
16725417-16725422,16725789-16725858,16727825-16728693,
16729109-16729198,16730071-16730356,16730573-16730592
Length = 446
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -3
Query: 652 DDTVITRTFRVIELQVLFVLGGHDLEVNSVVFQHGGKLPGDFLAGFVFG 506
DDT V+ ++ VLGG D+ V F GG + L GF+FG
Sbjct: 155 DDTTTEDDLMVVSAELEKVLGGVDVASARVSFAMGGGVDCP-LQGFLFG 202
>05_03_0618 - 16262826-16263097,16263111-16263183
Length = 114
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 175 SSWCKCGVRSQRTHGEDEGKQSQSHLGAV 89
S C+CG+RS+R +E + + LG V
Sbjct: 24 SGHCRCGLRSRRCTAREEFRSKEEMLGIV 52
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 654 TVIAPLTPSNTTGTLSPSMYES--DVMFFVYNRXYNSVMTLDEDMAANEDREAWGQRR 821
TV+ PL+P N+ G S Y+S D +YN+ + E++ ++ A G ++
Sbjct: 214 TVLIPLSPGNSDGEDDDSEYDSEDDDSEMIYNQRRGKSSVVIEEIQEDDKPAAGGAQK 271
>03_02_0950 + 12661008-12662312,12662403-12662576
Length = 492
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 179 DVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEV 280
+VL+ + +GEY+ AIA CS+ L++ K V
Sbjct: 411 EVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNV 444
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 491 IAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNT 625
I F D K+K K K +EN+ + F +M+ D QYL +NT
Sbjct: 354 ILFNDMKEKGVKSGK-KCVLSMENHGIGFLLMAYNDVQYLVPNNT 397
>01_03_0271 +
14454681-14456949,14457222-14457476,14458800-14458864,
14459053-14459171,14459270-14459324
Length = 920
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -1
Query: 162 SVALEASAHTARTKANKVSLI-LAQWLSFESKSTNNIKS 49
S+ + A +K NKV+L+ L++WLS + +TN++ S
Sbjct: 5 SILVRNFAGNTSSKFNKVALLKLSRWLSGSTPNTNSLSS 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,151,953
Number of Sequences: 37544
Number of extensions: 490087
Number of successful extensions: 1591
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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