Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_K18
         (1224 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122...    29   9.8  
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724...    29   9.8  

>08_02_0846 -
           21811156-21811833,21811960-21812055,21812157-21812267,
           21812367-21812743,21814699-21814734,21815236-21815839
          Length = 633

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +1

Query: 247 SKEELLMEIPXHDALVVRSAXQVTKE 324
           S  ELL ++   DAL+VRS  +VT+E
Sbjct: 107 SPAELLAKVAQFDALIVRSGTKVTRE 132


>06_03_0975 -
           26471438-26472109,26472189-26472284,26472372-26472482,
           26472494-26472530,26472566-26472576,26472674-26473050,
           26474310-26474895
          Length = 629

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 253 EELLMEIPXHDALVVRSAXQVTKE 324
           EEL  ++   DALVVRSA +VT+E
Sbjct: 103 EELRAKVSLVDALVVRSATRVTRE 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,420,679
Number of Sequences: 37544
Number of extensions: 214802
Number of successful extensions: 244
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3759607596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)